The 2.0 version of rSNPBase

Variant report

Variant rs73551789
Chromosome Location chr19:39676113-39676114
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39657800-39687600 Weak transcription Right Atrium heart
2 chr19:39661400-39684600 Weak transcription HSMM muscle
3 chr19:39662600-39681800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr19:39663200-39681400 Weak transcription Fetal Kidney kidney
5 chr19:39666000-39676600 Weak transcription Fetal Lung lung
6 chr19:39666000-39677000 Weak transcription Fetal Brain Male brain
7 chr19:39667400-39679600 Weak transcription HSMMtube muscle
8 chr19:39669200-39685800 Weak transcription NHEK skin
9 chr19:39669400-39678200 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr19:39669600-39677800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr19:39669600-39678200 Weak transcription H1 Cell Line embryonic stem cell
12 chr19:39669800-39678200 Weak transcription Right Ventricle heart
13 chr19:39670600-39678400 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr19:39670800-39678200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr19:39671000-39678200 Weak transcription Esophagus oesophagus
16 chr19:39671000-39678400 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr19:39671000-39678400 Weak transcription Spleen Spleen
18 chr19:39672000-39677800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr19:39672000-39677800 Weak transcription Duodenum Mucosa Duodenum
20 chr19:39672000-39683600 Weak transcription Pancreas Pancrea
21 chr19:39672400-39676200 Weak transcription Colonic Mucosa Colon
22 chr19:39672400-39677800 Weak transcription Fetal Intestine Large intestine
23 chr19:39672400-39678200 Weak transcription Lung lung
24 chr19:39672600-39676200 Weak transcription NHLF lung
25 chr19:39672600-39677200 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr19:39672600-39678200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr19:39672600-39678200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr19:39672800-39676600 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr19:39672800-39677800 Weak transcription Placenta Placenta
30 chr19:39672800-39678200 Weak transcription Placenta Amnion Placenta Amnion
31 chr19:39672800-39683600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr19:39673000-39678000 Weak transcription Fetal Brain Female brain
33 chr19:39673000-39678200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr19:39673000-39678200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr19:39673000-39681400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr19:39673000-39684200 Weak transcription Gastric stomach
37 chr19:39673200-39677800 Weak transcription HepG2 liver
38 chr19:39673200-39681400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr19:39673400-39678200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr19:39674400-39678200 Weak transcription A549 lung
41 chr19:39674600-39677800 Weak transcription Fetal Intestine Small intestine
42 chr19:39675400-39681800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr19:39675800-39676200 Strong transcription Fetal Stomach stomach
44 chr19:39676000-39676200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015