Variant report

Variant	rs73553794
Chromosome Location	chr6:132581290-132581291
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs61700588	1.00[AMR][1000 genomes]
rs73541951	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73541955	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73541960	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73553747	1.00[AMR][1000 genomes]
rs73553751	1.00[AMR][1000 genomes]
rs73553760	1.00[AMR][1000 genomes]
rs73553791	0.95[AFR][1000 genomes]
rs73555605	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9321338	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762616	chr6:132404708-132584324	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132569600-132581600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:132575400-132588400	Weak transcription	Aorta	Aorta
3	chr6:132580800-132581800	Weak transcription	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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