Variant report

Variant rs73554025
Chromosome Location chr9:139609104-139609105
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139606600-139618000 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr9:139607200-139609800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr9:139607200-139617400 Weak transcription Aorta Aorta
4 chr9:139607600-139609800 Flanking Active TSS HUVEC blood vessel
5 chr9:139607800-139610000 Enhancers Lung lung
6 chr9:139608000-139609200 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr9:139608000-139609800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr9:139608000-139613800 Weak transcription Placenta Amnion Placenta Amnion
9 chr9:139608000-139617000 Weak transcription H9 Cell Line embryonic stem cell
10 chr9:139608200-139609400 Enhancers Fetal Brain Male brain
11 chr9:139608200-139609800 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
12 chr9:139608200-139609800 Enhancers Primary B cells from cord blood blood
13 chr9:139608200-139609800 Genic enhancers Fetal Intestine Small intestine
14 chr9:139608200-139609800 Enhancers Right Ventricle heart
15 chr9:139608200-139609800 Enhancers Spleen Spleen
16 chr9:139608200-139610000 Enhancers Left Ventricle heart
17 chr9:139608200-139610600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
18 chr9:139608200-139617200 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr9:139608200-139620400 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr9:139608400-139609200 Enhancers Brain Angular Gyrus brain
21 chr9:139608400-139609400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr9:139608400-139609800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr9:139608400-139610000 Enhancers Fetal Muscle Leg muscle
24 chr9:139608400-139614000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr9:139608400-139614800 Weak transcription H1 Cell Line embryonic stem cell
26 chr9:139608400-139615800 Weak transcription Gastric stomach
27 chr9:139608400-139617000 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr9:139608400-139617200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr9:139608400-139617800 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr9:139608600-139609200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
31 chr9:139608600-139609200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
32 chr9:139608600-139609200 Bivalent Enhancer Stomach Smooth Muscle stomach
33 chr9:139608600-139609400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
34 chr9:139608600-139609400 Enhancers Fetal Muscle Trunk muscle
35 chr9:139608600-139609600 Enhancers Fetal Thymus thymus
36 chr9:139608600-139609600 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
37 chr9:139608600-139609600 Enhancers A549 lung
38 chr9:139608600-139609800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr9:139608600-139609800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr9:139608600-139609800 Transcr. at gene 5' and 3' Fetal Brain Female brain
41 chr9:139608600-139610000 Enhancers Primary neutrophils fromperipheralblood blood
42 chr9:139608600-139610000 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr9:139608600-139610600 Enhancers Adipose Nuclei Adipose
44 chr9:139608600-139614400 Weak transcription Right Atrium heart
45 chr9:139608600-139614600 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr9:139608600-139616400 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr9:139608600-139616800 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr9:139608800-139609200 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr9:139608800-139609200 Weak transcription Pancreas Pancrea
50 chr9:139608800-139609400 Enhancers GM12878-XiMat blood

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