Variant report

Variant	rs73555985
Chromosome Location	chr13:61518553-61518554
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17059182	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56768687	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7327102	1.00[AMR][1000 genomes]
rs73555968	1.00[AMR][1000 genomes]
rs73555970	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73557907	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73557970	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832624	chr13:61383648-61553974	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:61517200-61519800	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr13:61517800-61519600	Weak transcription	Esophagus	oesophagus
3	chr13:61518000-61519800	Enhancers	NHEK	skin
4	chr13:61518200-61519600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr13:61518400-61518800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr13:61518400-61519400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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