Variant report

Variant	rs73559628
Chromosome Location	chr6:133674769-133674770
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs3777840	1.00[AMR][1000 genomes]
rs3777846	1.00[AMR][1000 genomes]
rs3822933	1.00[AMR][1000 genomes]
rs60182967	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73559612	0.95[AFR][1000 genomes]
rs73559615	0.93[AFR][1000 genomes]
rs73559619	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73559630	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73559632	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73559633	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73559634	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73559647	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9493608	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133662200-133679200	Weak transcription	Psoas Muscle	Psoas
2	chr6:133668000-133679200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr6:133669000-133678600	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr6:133673600-133687600	Weak transcription	Hela-S3	cervix
5	chr6:133674000-133674800	Enhancers	Fetal Heart	heart
6	chr6:133674000-133689800	Weak transcription	A549	lung
7	chr6:133674600-133675000	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr6:133674600-133679800	Weak transcription	Skeletal Muscle Male	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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