Variant report

Variant	rs73561590
Chromosome Location	chr6:134092040-134092041
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830812	chr6:133993897-134165407	Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv34122	chr6:134089019-134378252	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
3	esv2608977	chr6:134091567-134093190	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:134086200-134112400	Weak transcription	Aorta	Aorta
2	chr6:134089000-134092400	Weak transcription	NHLF	lung
3	chr6:134089000-134095400	Weak transcription	A549	lung
4	chr6:134090800-134093400	Weak transcription	Stomach Smooth Muscle	stomach
5	chr6:134090800-134095400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr6:134091000-134095000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr6:134091000-134095200	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr6:134091000-134095400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr6:134091000-134095400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr6:134091000-134095400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr6:134091000-134095400	Weak transcription	Osteobl	bone
12	chr6:134091000-134095600	Weak transcription	NHDF-Ad	bronchial
13	chr6:134091000-134100000	Weak transcription	Rectal Smooth Muscle	rectum
14	chr6:134091200-134095800	Weak transcription	HSMM	muscle
15	chr6:134092000-134092200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr6:134092000-134094800	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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