Variant report

(count:20 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr19:45073960-45074110	GM12870	blood:	n/a	n/a
2	ELF1	chr19:45073932-45074425	A549	lung:	n/a	n/a
3	CTCF	chr19:45073920-45074070	SK-N-SH_RA	brain:	n/a	n/a
4	CTCF	chr19:45073959-45074610	SK-N-SH	brain:	n/a	n/a
5	CTCF	chr19:45073900-45074050	K562	blood:	n/a	n/a
6	RAD21	chr19:45073977-45074629	HCT-116	colon:	n/a	n/a
7	CTCF	chr19:45073920-45074070	WI-38	lung:	n/a	n/a
8	CTCF	chr19:45073880-45074030	HEEpiC	esophagus:	n/a	n/a
9	CTCF	chr19:45073923-45074007	ProgFib	skin:	n/a	n/a
10	RAD21	chr19:45073892-45074622	SK-N-SH	brain:	n/a	n/a
11	CTCF	chr19:45073920-45074070	SAEC	small airway:	n/a	n/a
12	CTCF	chr19:45073923-45074025	Fibrobl	skin:	n/a	n/a
13	CTCF	chr19:45073968-45073995	GM13976	blood:	n/a	n/a
14	CTCF	chr19:45073920-45074070	GM12872	blood:	n/a	n/a
15	CTCF	chr19:45073880-45074030	HPF	lung:	n/a	n/a
16	RCOR1	chr19:45073884-45074342	K562	blood:	n/a	n/a
17	CTCF	chr19:45073922-45074044	K562	blood:	n/a	n/a
18	CTCF	chr19:45073694-45075713	A549	lung:	n/a	chr19:45075149-45075162
19	RAD21	chr19:45073917-45074637	A549	lung:	n/a	n/a
20	RCOR1	chr19:45073964-45074143	K562	blood:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:45016284..45016826-chr19:45073849..45074372,2	MCF-7	breast:
2	chr19:45073833..45074821-chr19:45348052..45348614,3	K562	blood:

No data

Variant related genes	Relation type
ENSG00000224366	TF binding region

rSNPs within LD-proxies of this variant (count:4)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1062812	chr19:45042262-45214796	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	20 gene(s)	inside rSNPs	diseases
2	nsv960931	chr19:45073821-45102725	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:45070000-45074400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr19:45070400-45080400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr19:45070600-45075200	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr19:45073600-45074200	Enhancers	HepG2	liver
5	chr19:45073800-45076400	Enhancers	K562	blood

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