Variant report

Variant	rs73568191
Chromosome Location	chr8:34610105-34610106
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs73566135	0.93[AFR][1000 genomes]
rs73570032	0.93[AFR][1000 genomes]
rs73570041	0.93[AFR][1000 genomes]
rs73576130	0.87[AFR][1000 genomes]
rs73576168	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831283	chr8:34501243-34662634	Enhancers Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv525800	chr8:34568015-34615454	Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv890715	chr8:34568015-34700530	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv1815008	chr8:34577042-34615454	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv1810036	chr8:34577042-34620708	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34609400-34610200	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr8:34609400-34611000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr8:34609400-34611800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr8:34609600-34610200	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr8:34609600-34610200	Enhancers	Brain Germinal Matrix	brain
6	chr8:34610000-34610200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr8:34610000-34611000	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr8:34610000-34611000	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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