Variant report

Variant	rs73577816
Chromosome Location	chr11:101977431-101977432
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:101977394-101977444	HCF	heart:	n/a
2	chr11:101977394-101977444	A549	lung:	n/a
3	chr11:101977394-101977444	GM12892	blood:	n/a
4	chr11:101977394-101977444	HAEpiC	amniotic membrane:	n/a
5	chr11:101977394-101977444	SK-N-SH_RA	brain:	n/a
6	chr11:101977394-101977444	AoSMC	blood vessel:	n/a
7	chr11:101977394-101977444	CMK	blood:	n/a
8	chr11:101977394-101977444	HCM	heart:	n/a
9	chr11:101977394-101977444	PFSK-1	brain:	n/a
10	chr11:101977394-101977444	LNCaP	prostate:	n/a
11	chr11:101977394-101977444	BE2_C	brain:	n/a
12	chr11:101977394-101977444	HRCEpiC	kidney:	n/a
13	chr11:101977394-101977444	AG10803	skin:	n/a
14	chr11:101977394-101977444	HEEpiC	esophagus:	n/a
15	chr11:101977394-101977444	HL-60	blood:	n/a
16	chr11:101977394-101977444	AG09309	skin:	n/a
17	chr11:101977394-101977444	ProgFib	skin:	n/a
18	chr11:101977394-101977444	BJ	skin:	n/a
19	chr11:101977394-101977444	HEK293	kidney:	embryo
20	chr11:101977394-101977444	HCPEpiC	choroid plexus:	n/a
21	chr11:101977394-101977444	SK-N-SH	brain:	n/a
22	chr11:101977394-101977444	GM12878	blood:	n/a
23	chr11:101977394-101977444	AG04450	lung:	fetal
24	chr11:101977394-101977444	HRE	kidney:	n/a
25	chr11:101977394-101977444	T-47D	breast:	n/a
26	chr11:101977394-101977444	GM12891	blood:	n/a
27	chr11:101977394-101977444	PANC-1	pancreas:	n/a
28	chr11:101977394-101977444	NHBE	bronchial:	n/a
29	chr11:101977394-101977444	Caco-2	colon:	n/a
30	chr11:101977394-101977444	AG04449	skin:	fetal
31	chr11:101977394-101977444	HepG2	liver:	n/a
32	chr11:101977394-101977444	HUVEC	blood vessel:	n/a
33	chr11:101977394-101977444	HPAEpiC	pulmonary alveolar:	n/a
34	chr11:101977394-101977444	SAEC	small airway:	n/a
35	chr11:101977394-101977444	Hela-S3	cervix:	n/a
36	chr11:101977394-101977444	GM06990	blood:	n/a
37	chr11:101977394-101977444	HCT-116	colon:	n/a
38	chr11:101977394-101977444	NH-A	brain:	n/a
39	chr11:101977394-101977444	HRPEpiC	eye:	n/a
40	chr11:101977394-101977444	RPTEC	kidney:	n/a
41	chr11:101977394-101977444	PrEC	prostate:	n/a
42	chr11:101977394-101977444	ECC-1	luminal epithelium:	n/a
43	chr11:101977394-101977444	MCF10A-Er-Src	breast:	n/a
44	chr11:101977394-101977444	SKMC	muscle:	n/a
45	chr11:101977394-101977444	NB4	blood:	n/a
46	chr11:101977394-101977444	NHDF-neo	bronchial:	n/a
47	chr11:101977394-101977444	MCF-7	breast:	n/a
48	chr11:101977394-101977444	HNPCEpiC	eye:	n/a
49	chr11:101977394-101977444	Jurkat	blood:	n/a
50	chr11:101977394-101977444	AG09319	gingival:	n/a

No data

Variant related genes	Relation type
YAP1	CpG island
ENSG00000260008	CpG island

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs12417236	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12420608	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17097445	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1942681	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4754040	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4754832	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57102842	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs58421489	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs58715614	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs59739003	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73577857	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73577867	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73577889	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73577900	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73579981	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73582014	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs948736	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs974830	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3362945	chr11:101736547-102114246	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv898333	chr11:101832670-102079986	Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:101968000-101980400	Weak transcription	Right Atrium	heart
2	chr11:101976400-101979800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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