Variant report

Variant	rs73584180
Chromosome Location	chr6:147321781-147321782
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:147320987..147322720-chr6:147523518..147525285,2	K562	blood:
2	chr6:147321773..147324598-chr6:147327146..147330616,3	K562	blood:
3	chr6:147320535..147323169-chr6:147518851..147520491,2	K562	blood:
4	chr6:147321773..147324598-chr6:147327146..147330616,4	K562	blood:
5	chr6:147320581..147322158-chr6:147325535..147327039,2	K562	blood:
6	chr6:147320621..147322907-chr6:147526530..147528654,2	K562	blood:

Variant related genes	Relation type
ENSG00000233452	Chromatin interaction
ENSG00000164506	Chromatin interaction

rs_ID	r²[population]
rs56899999	1.00[AMR][1000 genomes]
rs73582299	0.87[AFR][1000 genomes]
rs73584150	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147320600-147322400	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr6:147320800-147321800	Enhancers	NHDF-Ad	bronchial
3	chr6:147320800-147322000	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr6:147320800-147323000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr6:147321000-147322000	Enhancers	Muscle Satellite Cultured Cells	--
6	chr6:147321000-147322200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
7	chr6:147321000-147322200	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr6:147321000-147322200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr6:147321000-147322600	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr6:147321000-147322600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr6:147321000-147322600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr6:147321200-147321800	Enhancers	HSMM	muscle
13	chr6:147321200-147321800	Enhancers	NHLF	lung
14	chr6:147321200-147321800	Enhancers	Osteobl	bone
15	chr6:147321200-147322000	Enhancers	Ovary	ovary
16	chr6:147321200-147322800	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr6:147321200-147322800	Enhancers	HSMMtube	muscle
18	chr6:147321200-147323000	Enhancers	Adipose Nuclei	Adipose
19	chr6:147321400-147321800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr6:147321400-147321800	Weak transcription	Psoas Muscle	Psoas
21	chr6:147321600-147322200	Flanking Active TSS	K562	blood
22	chr6:147321600-147322400	Enhancers	A549	lung
23	chr6:147321600-147322600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr6:147321600-147322800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr6:147321600-147323200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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