Variant report

Variant	rs7358873
Chromosome Location	chr13:37490595-37490596
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:37483882..37487879-chr13:37488428..37492831,4	K562	blood:
2	chr13:37487996..37490729-chr13:37494264..37495898,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000120693	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7338929	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948975	chr13:37281203-38280430	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv522336	chr13:37305641-37584838	Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:37474400-37492600	Weak transcription	Ovary	ovary
2	chr13:37479000-37491600	Weak transcription	HSMM	muscle
3	chr13:37480400-37490800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr13:37485000-37491000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr13:37485200-37491000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr13:37487200-37491000	Weak transcription	HUVEC	blood vessel
7	chr13:37487600-37492600	Weak transcription	HSMMtube	muscle
8	chr13:37488000-37492400	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr13:37488000-37492400	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr13:37488200-37492400	Enhancers	Skeletal Muscle Female	skeletal muscle
11	chr13:37488400-37491000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr13:37488400-37493000	Weak transcription	Gastric	stomach
13	chr13:37489200-37491000	Enhancers	Fetal Brain Male	brain
14	chr13:37489200-37491200	Enhancers	Rectal Smooth Muscle	rectum
15	chr13:37489200-37491400	Enhancers	Fetal Muscle Leg	muscle
16	chr13:37489200-37492400	Enhancers	Fetal Brain Female	brain
17	chr13:37489400-37490800	Weak transcription	Brain Angular Gyrus	brain
18	chr13:37489400-37491800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
19	chr13:37489600-37490600	Weak transcription	Colon Smooth Muscle	Colon
20	chr13:37489600-37491600	Weak transcription	Muscle Satellite Cultured Cells	--
21	chr13:37489600-37491800	Weak transcription	Fetal Heart	heart
22	chr13:37489600-37491800	Weak transcription	Rectal Mucosa Donor 31	rectum
23	chr13:37489600-37492400	Weak transcription	Right Atrium	heart
24	chr13:37489800-37492400	Weak transcription	Osteobl	bone
25	chr13:37490000-37491200	Enhancers	Fetal Kidney	kidney
26	chr13:37490200-37490800	Enhancers	Brain Inferior Temporal Lobe	brain
27	chr13:37490200-37491200	Enhancers	Aorta	Aorta
28	chr13:37490200-37491200	Enhancers	Brain Cingulate Gyrus	brain
29	chr13:37490200-37492400	Enhancers	HepG2	liver
30	chr13:37490200-37492600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr13:37490200-37492600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr13:37490400-37490800	Weak transcription	Fetal Lung	lung
33	chr13:37490400-37491400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr13:37490400-37491600	Weak transcription	Brain Germinal Matrix	brain
35	chr13:37490400-37492000	Enhancers	Brain Hippocampus Middle	brain
36	chr13:37490400-37492800	Weak transcription	Right Ventricle	heart

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