Variant report

Variant	rs7359234
Chromosome Location	chr15:75880054-75880055
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11856221	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531901	chr15:75600108-76019966	Genic enhancers Flanking Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	166 gene(s)	inside rSNPs	diseases
2	esv3445070	chr15:75623136-76045948	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases
3	nsv530345	chr15:75628556-75951011	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	158 gene(s)	inside rSNPs	diseases
4	nsv1048028	chr15:75637515-76019967	Strong transcription Genic enhancers Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	161 gene(s)	inside rSNPs	diseases
5	nsv542436	chr15:75637515-76019967	Strong transcription Weak transcription Flanking Active TSS Genic enhancers Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	161 gene(s)	inside rSNPs	diseases
6	nsv482802	chr15:75686519-75899896	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
7	esv1800424	chr15:75692303-75991451	Flanking Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	124 gene(s)	inside rSNPs	diseases
8	nsv531902	chr15:75724505-75919237	Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:75872200-75888600	Weak transcription	Aorta	Aorta
2	chr15:75872400-75882600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr15:75872400-75882600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr15:75872400-75882600	Weak transcription	Adipose Nuclei	Adipose
5	chr15:75872400-75882600	Weak transcription	NHDF-Ad	bronchial
6	chr15:75872400-75882800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr15:75872400-75882800	Weak transcription	Brain Hippocampus Middle	brain
8	chr15:75872400-75883000	Weak transcription	Rectal Mucosa Donor 31	rectum
9	chr15:75872400-75883600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr15:75872400-75883600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr15:75872400-75883600	Weak transcription	Fetal Intestine Large	intestine
12	chr15:75872400-75883800	Weak transcription	Fetal Heart	heart
13	chr15:75872400-75884000	Weak transcription	Skeletal Muscle Female	skeletal muscle
14	chr15:75872400-75884000	Weak transcription	Spleen	Spleen
15	chr15:75872400-75884000	Weak transcription	NHEK	skin
16	chr15:75872400-75884200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr15:75872400-75884200	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr15:75872400-75884200	Weak transcription	Left Ventricle	heart
19	chr15:75872400-75884200	Weak transcription	Stomach Mucosa	stomach
20	chr15:75872400-75884200	Weak transcription	GM12878-XiMat	blood
21	chr15:75872400-75885800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr15:75872400-75886000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr15:75872400-75886000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr15:75872400-75886600	Weak transcription	Primary B cells from cord blood	blood
25	chr15:75872400-75886600	Weak transcription	Brain Anterior Caudate	brain
26	chr15:75872400-75886600	Weak transcription	Brain Cingulate Gyrus	brain
27	chr15:75872400-75886600	Weak transcription	Placenta Amnion	Placenta Amnion
28	chr15:75872400-75886600	Weak transcription	NH-A	brain
29	chr15:75872400-75886800	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chr15:75872400-75886800	Weak transcription	Fetal Lung	lung
31	chr15:75872400-75887600	Weak transcription	Brain Inferior Temporal Lobe	brain
32	chr15:75872400-75887800	Weak transcription	Brain Angular Gyrus	brain
33	chr15:75872400-75887800	Weak transcription	Lung	lung
34	chr15:75872400-75888000	Weak transcription	H9 Cell Line	embryonic stem cell
35	chr15:75872400-75888000	Weak transcription	Brain Substantia Nigra	brain
36	chr15:75872400-75888200	Weak transcription	NHLF	lung
37	chr15:75872400-75888400	Weak transcription	Fetal Kidney	kidney
38	chr15:75872400-75889600	Weak transcription	Rectal Smooth Muscle	rectum
39	chr15:75872400-75890600	Weak transcription	Psoas Muscle	Psoas
40	chr15:75872400-75891600	Weak transcription	Pancreas	Pancrea
41	chr15:75872400-75892000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr15:75872400-75898600	Weak transcription	Small Intestine	intestine
43	chr15:75872600-75880200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr15:75872600-75880800	Weak transcription	Fetal Muscle Trunk	muscle
45	chr15:75872600-75882200	Weak transcription	Rectal Mucosa Donor 29	rectum
46	chr15:75872600-75882600	Weak transcription	Primary hematopoietic stem cells	blood
47	chr15:75872600-75882600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr15:75872600-75882600	Weak transcription	Placenta	Placenta
49	chr15:75872600-75883000	Weak transcription	Fetal Intestine Small	intestine
50	chr15:75872600-75883600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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