Variant report

Variant	rs73598567
Chromosome Location	chr10:22858201-22858202
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22856169..22859441-chr10:22860666..22863498,3	K562	blood:
2	chr10:22850543..22852736-chr10:22856330..22858798,3	K562	blood:
3	chr10:22857941..22860806-chr10:22861739..22864116,2	K562	blood:
4	chr10:22852845..22855648-chr10:22856213..22858809,2	K562	blood:

rs_ID	r²[population]
rs10159727	0.81[AFR][1000 genomes]
rs11819401	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs58498866	1.00[EUR][1000 genomes]
rs61731109	0.90[EUR][1000 genomes]
rs73598557	0.90[EUR][1000 genomes]
rs73598558	0.90[EUR][1000 genomes]
rs73598561	0.90[EUR][1000 genomes]
rs73598564	0.97[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22822800-22870200	Strong transcription	Monocytes-CD14+_RO01746	blood
2	chr10:22825000-22863800	Weak transcription	Hela-S3	cervix
3	chr10:22825600-22888000	Weak transcription	HMEC	breast
4	chr10:22829000-22887400	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr10:22830800-22861000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr10:22839000-22859400	Strong transcription	Primary T cells from cord blood	blood
7	chr10:22839600-22865200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr10:22844000-22876600	Weak transcription	Right Ventricle	heart
9	chr10:22844200-22861800	Weak transcription	HSMM	muscle
10	chr10:22844200-22862400	Weak transcription	Stomach Mucosa	stomach
11	chr10:22844200-22876200	Weak transcription	Ovary	ovary
12	chr10:22844200-22877200	Weak transcription	Colon Smooth Muscle	Colon
13	chr10:22844200-22904800	Weak transcription	Rectal Smooth Muscle	rectum
14	chr10:22844400-22860600	Weak transcription	Fetal Kidney	kidney
15	chr10:22846200-22862800	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr10:22847400-22862400	Strong transcription	Fetal Thymus	thymus
17	chr10:22847400-22862800	Strong transcription	Primary monocytes fromperipheralblood	blood
18	chr10:22848000-22859400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
19	chr10:22849600-22861000	Weak transcription	Fetal Lung	lung
20	chr10:22849600-22879000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr10:22850000-22869600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr10:22850400-22878800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr10:22850400-22882000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr10:22850400-22882600	Weak transcription	Cortex derived primary cultured neurospheres	brain
25	chr10:22850800-22862400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr10:22851000-22860000	Weak transcription	Fetal Brain Male	brain
27	chr10:22851000-22861400	Weak transcription	Brain Germinal Matrix	brain
28	chr10:22851600-22859400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
29	chr10:22851800-22874800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
30	chr10:22852600-22859200	Weak transcription	Placenta Amnion	Placenta Amnion
31	chr10:22852800-22859600	Strong transcription	Fetal Stomach	stomach
32	chr10:22853600-22859200	Strong transcription	Primary T helper cells fromperipheralblood	blood
33	chr10:22853600-22861600	Weak transcription	A549	lung
34	chr10:22853600-22878600	Weak transcription	HUVEC	blood vessel
35	chr10:22853800-22876200	Weak transcription	Osteobl	bone
36	chr10:22854000-22869600	Weak transcription	Pancreas	Pancrea
37	chr10:22854000-22879000	Weak transcription	Muscle Satellite Cultured Cells	--
38	chr10:22854200-22860400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr10:22854200-22866400	Weak transcription	Liver	Liver
40	chr10:22854200-22887400	Weak transcription	NHDF-Ad	bronchial
41	chr10:22854200-22887400	Weak transcription	NHEK	skin
42	chr10:22854600-22859200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
43	chr10:22854600-22859200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr10:22854600-22867400	Weak transcription	Fetal Brain Female	brain
45	chr10:22854800-22859000	Strong transcription	Primary T helper cells PMA-I stimulated	--
46	chr10:22854800-22862800	Strong transcription	Primary B cells from cord blood	blood
47	chr10:22855000-22859800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chr10:22855200-22858400	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr10:22855200-22858600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
50	chr10:22855200-22858800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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