Variant report

Variant	rs73602526
Chromosome Location	chr10:23652329-23652330
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:23646010..23648566-chr10:23651251..23652960,2	MCF-7	breast:
2	chr10:23650512..23653153-chr10:23656830..23658676,2	K562	blood:

rs_ID	r²[population]
rs73602532	1.00[AMR][1000 genomes]
rs73602534	1.00[AMR][1000 genomes]

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23641800-23653600	Weak transcription	HMEC	breast
2	chr10:23648200-23652600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr10:23650600-23653400	Weak transcription	NHEK	skin
4	chr10:23650600-23657600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr10:23650800-23652600	Enhancers	GM12878-XiMat	blood
6	chr10:23651000-23652400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr10:23651200-23652400	Enhancers	Primary neutrophils fromperipheralblood	blood
8	chr10:23651200-23652400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
9	chr10:23651200-23652400	Enhancers	Primary T helper naive cells from peripheral blood	blood
10	chr10:23651200-23652400	Enhancers	Primary T killer memory cells from peripheral blood	blood
11	chr10:23651200-23652800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
12	chr10:23651200-23653000	Enhancers	Primary B cells from cord blood	blood
13	chr10:23651800-23652400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
14	chr10:23652000-23653000	Flanking Active TSS	Primary T cells from cord blood	blood
15	chr10:23652000-23653000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
16	chr10:23652000-23653000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
17	chr10:23652000-23653800	Bivalent Enhancer	Primary B cells from peripheral blood	blood
18	chr10:23652200-23652600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr10:23652200-23653200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
20	chr10:23652200-23653200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
21	chr10:23652200-23653200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
22	chr10:23652200-23653600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links