Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:23707420..23709381-chr10:23709579..23712222,2	MCF-7	breast:
2	chr10:23707659..23710608-chr10:23712696..23714287,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73602545	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825305	chr10:23698620-23740919	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	6 gene(s)	inside rSNPs	diseases
2	esv10624	chr10:23699287-23708458	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3314141	chr10:23700976-23708572	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3314130	chr10:23701135-23708352	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3314152	chr10:23701135-23708352	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23701600-23709600	Weak transcription	Hela-S3	cervix
2	chr10:23704400-23709000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr10:23706400-23708600	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr10:23706400-23708600	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr10:23706400-23708800	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr10:23706400-23708800	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr10:23706600-23708400	Enhancers	H9 Cell Line	embryonic stem cell
8	chr10:23706600-23708600	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr10:23706600-23708600	Weak transcription	NHEK	skin
10	chr10:23706600-23708800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr10:23706800-23709000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr10:23707000-23711200	Weak transcription	Placenta	Placenta
13	chr10:23707400-23708400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr10:23707400-23709800	Enhancers	Fetal Lung	lung
15	chr10:23707800-23708400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr10:23707800-23708800	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr10:23707800-23708800	Enhancers	iPS-20b Cell Line	embryonic stem cell
18	chr10:23707800-23709200	Enhancers	H1 Cell Line	embryonic stem cell
19	chr10:23708200-23708400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr10:23708200-23708600	Enhancers	Pancreas	Pancrea

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