The 2.0 version of rSNPBase

Variant report

Variant rs73617193
Chromosome Location chr6:131257916-131257917
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131220600-131281200 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr6:131234800-131266600 Weak transcription GM12878-XiMat blood
3 chr6:131244200-131279000 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr6:131246200-131264800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr6:131249000-131259000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr6:131251200-131268200 Weak transcription Right Atrium heart
7 chr6:131253000-131272800 Weak transcription Dnd41 blood
8 chr6:131253000-131302200 Weak transcription Primary B cells from cord blood blood
9 chr6:131254000-131258200 Enhancers NHLF lung
10 chr6:131254200-131258200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr6:131255000-131274600 Weak transcription Fetal Stomach stomach
12 chr6:131255200-131258000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr6:131255200-131258200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr6:131255200-131262600 Weak transcription Brain Inferior Temporal Lobe brain
15 chr6:131255200-131264600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr6:131255200-131265000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr6:131255200-131265800 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr6:131255200-131276000 Weak transcription Left Ventricle heart
19 chr6:131255400-131258200 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr6:131255400-131258200 Enhancers A549 lung
21 chr6:131255400-131258200 Enhancers HSMMtube muscle
22 chr6:131255400-131259200 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr6:131255400-131259200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr6:131255400-131259200 Enhancers HepG2 liver
25 chr6:131255400-131259200 Weak transcription HMEC breast
26 chr6:131255400-131259200 Weak transcription NH-A brain
27 chr6:131255400-131259600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:131255400-131264600 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr6:131255400-131276200 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr6:131255400-131288800 Weak transcription Fetal Kidney kidney
31 chr6:131255800-131258000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr6:131255800-131258000 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr6:131255800-131259200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr6:131255800-131264400 Weak transcription Fetal Intestine Small intestine
35 chr6:131255800-131265800 Weak transcription Pancreas Pancrea
36 chr6:131255800-131276200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr6:131255800-131277400 Weak transcription Psoas Muscle Psoas
38 chr6:131256000-131258000 Weak transcription Ovary ovary
39 chr6:131256000-131258800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr6:131256000-131263000 Weak transcription Fetal Muscle Trunk muscle
41 chr6:131256000-131279400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr6:131256200-131258400 Enhancers Fetal Lung lung
43 chr6:131256400-131259000 Weak transcription Brain Cingulate Gyrus brain
44 chr6:131256600-131258400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr6:131256600-131259200 Weak transcription Brain Anterior Caudate brain
46 chr6:131256600-131265200 Weak transcription Aorta Aorta
47 chr6:131256800-131258200 Enhancers HUES48 Cell Line embryonic stem cell
48 chr6:131256800-131258200 Weak transcription Brain Substantia Nigra brain
49 chr6:131256800-131258600 Enhancers HUES64 Cell Line embryonic stem cell
50 chr6:131257000-131259000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015