Variant report

Variant rs73617199
Chromosome Location chr19:38098954-38098955
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38086600-38099400 Weak transcription Fetal Stomach stomach
2 chr19:38086600-38103200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr19:38087200-38099400 Weak transcription Rectal Smooth Muscle rectum
4 chr19:38087200-38100200 Weak transcription Right Ventricle heart
5 chr19:38087200-38103000 Weak transcription Placenta Amnion Placenta Amnion
6 chr19:38087800-38107400 ZNF genes & repeats Liver Liver
7 chr19:38089200-38107200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
8 chr19:38090400-38105200 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
9 chr19:38090600-38105400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
10 chr19:38091200-38101000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr19:38092200-38103400 Weak transcription Thymus Thymus
12 chr19:38092400-38102400 Weak transcription Dnd41 blood
13 chr19:38093400-38100200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
14 chr19:38093600-38102800 Weak transcription Fetal Brain Female brain
15 chr19:38093600-38105000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
16 chr19:38093800-38099600 Weak transcription Pancreas Pancrea
17 chr19:38093800-38101000 Weak transcription Psoas Muscle Psoas
18 chr19:38094600-38102600 Weak transcription Fetal Brain Male brain
19 chr19:38094600-38103200 Weak transcription Brain Germinal Matrix brain
20 chr19:38095400-38099800 Strong transcription Left Ventricle heart
21 chr19:38095400-38107200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
22 chr19:38095600-38100000 ZNF genes & repeats Primary T cells from cord blood blood
23 chr19:38095600-38100000 ZNF genes & repeats Colon Smooth Muscle Colon
24 chr19:38095600-38105000 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
25 chr19:38095600-38105400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr19:38095800-38101000 Weak transcription Fetal Kidney kidney
27 chr19:38096000-38099600 Strong transcription Skeletal Muscle Female skeletal muscle
28 chr19:38096600-38100400 ZNF genes & repeats Ovary ovary
29 chr19:38096800-38099800 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
30 chr19:38096800-38099800 ZNF genes & repeats Brain Substantia Nigra brain
31 chr19:38096800-38105400 ZNF genes & repeats Primary T cells fromperipheralblood blood
32 chr19:38097000-38099800 ZNF genes & repeats Duodenum Mucosa Duodenum
33 chr19:38097200-38099200 Strong transcription Brain Hippocampus Middle brain
34 chr19:38097200-38100000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
35 chr19:38097400-38102600 Strong transcription Brain Angular Gyrus brain
36 chr19:38097400-38102600 Strong transcription Brain Inferior Temporal Lobe brain
37 chr19:38097600-38099000 Weak transcription Brain Cingulate Gyrus brain
38 chr19:38097600-38100800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr19:38098200-38099000 ZNF genes & repeats Colonic Mucosa Colon
40 chr19:38098200-38099200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr19:38098200-38107200 ZNF genes & repeats Adipose Nuclei Adipose
42 chr19:38098400-38099800 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
43 chr19:38098400-38100000 Strong transcription Primary T helper naive cells from peripheral blood blood
44 chr19:38098400-38100200 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
45 chr19:38098600-38099000 ZNF genes & repeats Primary T helper memory cells from peripheral blood 2 blood
46 chr19:38098600-38099400 Strong transcription Brain Anterior Caudate brain
47 chr19:38098600-38099600 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
48 chr19:38098600-38100000 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
49 chr19:38098800-38099000 ZNF genes & repeats Primary B cells from peripheral blood blood
50 chr19:38098800-38099000 ZNF genes & repeats Gastric stomach

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