The 2.0 version of rSNPBase

Variant report

Variant rs73617985
Chromosome Location chr8:38884989-38884990
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:38856600-38889600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr8:38856800-38889600 Weak transcription Colonic Mucosa Colon
3 chr8:38865000-38887200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr8:38865000-38889600 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr8:38865200-38887400 Strong transcription HUES64 Cell Line embryonic stem cell
6 chr8:38865400-38886000 Strong transcription Primary neutrophils fromperipheralblood blood
7 chr8:38865400-38887800 Strong transcription HSMM muscle
8 chr8:38865400-38888800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr8:38865600-38888200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr8:38865600-38889000 Strong transcription Primary monocytes fromperipheralblood blood
11 chr8:38866000-38888400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr8:38869600-38902800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr8:38869800-38885200 Weak transcription Aorta Aorta
14 chr8:38869800-38888400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr8:38870000-38886400 Weak transcription Pancreas Pancrea
16 chr8:38872000-38886200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr8:38872000-38890400 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr8:38872400-38888200 Strong transcription Fetal Intestine Large intestine
19 chr8:38872600-38889600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr8:38872600-38889800 Weak transcription Primary B cells from peripheral blood blood
21 chr8:38872800-38888000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr8:38874200-38886400 Strong transcription Fetal Muscle Trunk muscle
23 chr8:38874400-38888800 Strong transcription Hela-S3 cervix
24 chr8:38875000-38888400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr8:38875200-38885600 Weak transcription Fetal Heart heart
26 chr8:38875200-38888800 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr8:38875400-38886200 Weak transcription Right Atrium heart
28 chr8:38875400-38886600 Weak transcription Gastric stomach
29 chr8:38875400-38886800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr8:38875400-38889400 Weak transcription Esophagus oesophagus
31 chr8:38875400-38890200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr8:38875800-38895400 Weak transcription Brain Angular Gyrus brain
33 chr8:38876400-38888000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr8:38876600-38888000 Strong transcription Placenta Placenta
35 chr8:38877000-38885600 Weak transcription Stomach Mucosa stomach
36 chr8:38877400-38885800 Strong transcription Fetal Lung lung
37 chr8:38877400-38887400 Strong transcription Fetal Muscle Leg muscle
38 chr8:38878400-38886800 Strong transcription Fetal Adrenal Gland Adrenal Gland
39 chr8:38878600-38885800 Strong transcription Fetal Stomach stomach
40 chr8:38878600-38886000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr8:38878600-38888600 Strong transcription Dnd41 blood
42 chr8:38878800-38886800 Strong transcription HepG2 liver
43 chr8:38879000-38885200 Strong transcription Skeletal Muscle Female skeletal muscle
44 chr8:38879000-38885800 Strong transcription Stomach Smooth Muscle stomach
45 chr8:38879000-38886800 Strong transcription HUES48 Cell Line embryonic stem cell
46 chr8:38879000-38887200 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr8:38879000-38888000 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr8:38879000-38888400 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr8:38879200-38887000 Strong transcription iPS-18 Cell Line embryonic stem cell
50 chr8:38879200-38887200 Strong transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015