Variant report

Variant	rs73621371
Chromosome Location	chr6:150773745-150773746
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:150772857..150774646-chr6:150776022..150779797,3	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1009498	1.00[AMR][1000 genomes]
rs11962767	1.00[AMR][1000 genomes]
rs73605159	1.00[AMR][1000 genomes]
rs73607054	1.00[AMR][1000 genomes]
rs73621367	1.00[AMR][1000 genomes]
rs73779974	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020067	chr6:150730783-150870708	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv886772	chr6:150743364-151024280	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv886773	chr6:150751951-150799803	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150770800-150773800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:150772400-150774600	Enhancers	Fetal Heart	heart
3	chr6:150772800-150774600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:150772800-150774800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr6:150772800-150774800	Enhancers	Fetal Muscle Leg	muscle
6	chr6:150772800-150775800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr6:150773000-150774000	Enhancers	Right Atrium	heart
8	chr6:150773000-150774200	Enhancers	Lung	lung
9	chr6:150773000-150774800	Enhancers	Fetal Muscle Trunk	muscle
10	chr6:150773200-150773800	Enhancers	Fetal Stomach	stomach
11	chr6:150773200-150773800	Enhancers	Left Ventricle	heart
12	chr6:150773200-150775000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr6:150773200-150775000	Enhancers	Fetal Kidney	kidney
14	chr6:150773200-150775400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr6:150773400-150774400	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr6:150773400-150774600	Enhancers	HUVEC	blood vessel
17	chr6:150773600-150773800	Enhancers	Liver	Liver
18	chr6:150773600-150774200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr6:150773600-150774200	Enhancers	Placenta	Placenta
20	chr6:150773600-150774400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr6:150773600-150774400	Enhancers	Fetal Intestine Large	intestine
22	chr6:150773600-150774400	Enhancers	Fetal Lung	lung
23	chr6:150773600-150774600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr6:150773600-150774600	Enhancers	Adipose Nuclei	Adipose
25	chr6:150773600-150774800	Enhancers	H1 Cell Line	embryonic stem cell
26	chr6:150773600-150774800	Enhancers	Skeletal Muscle Male	skeletal muscle

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