The 2.0 version of rSNPBase

Variant report

Variant rs73630892
Chromosome Location chr19:38590388-38590389
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38539200-38591200 Weak transcription Small Intestine intestine
2 chr19:38551200-38613800 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr19:38567600-38605400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr19:38573600-38610000 Strong transcription Fetal Intestine Large intestine
5 chr19:38574000-38590600 Weak transcription Placenta Amnion Placenta Amnion
6 chr19:38579600-38590400 Weak transcription Esophagus oesophagus
7 chr19:38580000-38590600 Weak transcription Colon Smooth Muscle Colon
8 chr19:38580400-38590400 Weak transcription Primary T cells fromperipheralblood blood
9 chr19:38580400-38594800 Weak transcription HSMMtube muscle
10 chr19:38580600-38590400 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr19:38580600-38590600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr19:38580600-38596000 Weak transcription Stomach Mucosa stomach
13 chr19:38581600-38610000 Weak transcription Psoas Muscle Psoas
14 chr19:38581800-38590400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr19:38581800-38590400 Weak transcription Brain Germinal Matrix brain
16 chr19:38582000-38590400 Weak transcription Thymus Thymus
17 chr19:38582400-38590400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr19:38582400-38590400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr19:38584400-38597000 Weak transcription Right Atrium heart
20 chr19:38584600-38590400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr19:38584600-38590400 Weak transcription Left Ventricle heart
22 chr19:38584600-38590400 Weak transcription Right Ventricle heart
23 chr19:38584800-38602400 Weak transcription Fetal Brain Male brain
24 chr19:38584800-38602400 Weak transcription Fetal Heart heart
25 chr19:38586000-38592600 Strong transcription Rectal Mucosa Donor 31 rectum
26 chr19:38586200-38590400 Weak transcription Fetal Brain Female brain
27 chr19:38586400-38590400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr19:38586400-38590400 Weak transcription Brain Cingulate Gyrus brain
29 chr19:38586400-38590400 Weak transcription Brain Hippocampus Middle brain
30 chr19:38586400-38590400 Weak transcription Placenta Placenta
31 chr19:38586600-38590400 Weak transcription Pancreas Pancrea
32 chr19:38586600-38590600 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr19:38586800-38590400 Weak transcription Brain Angular Gyrus brain
34 chr19:38586800-38590400 Weak transcription Brain Anterior Caudate brain
35 chr19:38586800-38590400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr19:38586800-38590400 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr19:38586800-38590400 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr19:38586800-38590600 Weak transcription Brain Inferior Temporal Lobe brain
39 chr19:38586800-38590600 Weak transcription Lung lung
40 chr19:38586800-38590800 Weak transcription Brain Substantia Nigra brain
41 chr19:38587000-38605400 Strong transcription Primary B cells from peripheral blood blood
42 chr19:38587200-38603200 Strong transcription Primary B cells from cord blood blood
43 chr19:38587200-38613600 Strong transcription Cortex derived primary cultured neurospheres brain
44 chr19:38587400-38590400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr19:38587400-38613400 Strong transcription Duodenum Mucosa Duodenum
46 chr19:38588400-38593400 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr19:38588600-38590400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr19:38588600-38590600 Strong transcription HSMM muscle
49 chr19:38588600-38597200 Strong transcription Osteobl bone
50 chr19:38588600-38604000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015