Variant report

Variant	rs73633671
Chromosome Location	chr11:105327755-105327756
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12290673	1.00[AMR][1000 genomes]
rs57454398	1.00[AMR][1000 genomes]
rs58882543	1.00[AMR][1000 genomes]
rs60275885	1.00[AMR][1000 genomes]
rs7118817	1.00[AMR][1000 genomes]
rs73627612	1.00[AMR][1000 genomes]
rs73632922	1.00[AMR][1000 genomes]
rs73632927	1.00[AMR][1000 genomes]
rs73632929	1.00[AMR][1000 genomes]
rs73633145	1.00[AMR][1000 genomes]
rs73634713	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949337	chr11:104950007-105510193	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv556221	chr11:105243371-105392079	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105326600-105328000	Weak transcription	Placenta	Placenta
2	chr11:105327600-105329000	Strong transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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