Variant report

Variant	rs73645037
Chromosome Location	chr9:14276296-14276297
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:14263580..14266486-chr9:14276040..14277567,2	K562	blood:
2	chr9:14276126..14277701-chr9:14322854..14325225,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73645038	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023303	chr9:14025605-14286269	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv540069	chr9:14025605-14286269	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
3	nsv1029491	chr9:14033607-14942373	Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
4	nsv915804	chr9:14182608-14903050	Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
5	nsv916811	chr9:14210978-14542068	Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:80 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:14270800-14277200	Enhancers	Osteobl	bone
2	chr9:14271000-14279000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr9:14271200-14278400	Weak transcription	Lung	lung
4	chr9:14271200-14306800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr9:14271800-14277200	Weak transcription	HepG2	liver
6	chr9:14271800-14277400	Weak transcription	Pancreas	Pancrea
7	chr9:14272000-14277200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr9:14272000-14281400	Weak transcription	Duodenum Mucosa	Duodenum
9	chr9:14272200-14277200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr9:14272200-14296800	Weak transcription	Hela-S3	cervix
11	chr9:14272800-14277000	Enhancers	iPS-15b Cell Line	embryonic stem cell
12	chr9:14273000-14276600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr9:14273400-14281600	Weak transcription	Fetal Intestine Small	intestine
14	chr9:14273600-14277600	Weak transcription	Small Intestine	intestine
15	chr9:14273600-14285400	Weak transcription	Fetal Muscle Trunk	muscle
16	chr9:14274000-14276400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr9:14274000-14278400	Enhancers	A549	lung
18	chr9:14274000-14280000	Enhancers	Skeletal Muscle Female	skeletal muscle
19	chr9:14274000-14282800	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr9:14274400-14276600	Enhancers	Breast Myoepithelial Primary Cells	Breast
21	chr9:14274400-14276800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr9:14274400-14278800	Enhancers	Colon Smooth Muscle	Colon
23	chr9:14274400-14282600	Weak transcription	Sigmoid Colon	Sigmoid Colon
24	chr9:14274600-14277400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr9:14274600-14280000	Enhancers	Cortex derived primary cultured neurospheres	brain
26	chr9:14274600-14282800	Enhancers	NH-A	brain
27	chr9:14274800-14277600	Enhancers	H1 Cell Line	embryonic stem cell
28	chr9:14274800-14278400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr9:14274800-14278600	Enhancers	HUES64 Cell Line	embryonic stem cell
30	chr9:14274800-14278600	Enhancers	Skeletal Muscle Male	skeletal muscle
31	chr9:14275000-14276400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
32	chr9:14275000-14276400	Weak transcription	Stomach Smooth Muscle	stomach
33	chr9:14275000-14276800	Enhancers	HUES6 Cell Line	embryonic stem cell
34	chr9:14275000-14277200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr9:14275000-14277800	Enhancers	Fetal Brain Male	brain
36	chr9:14275000-14278800	Enhancers	ES-I3 Cell Line	embryonic stem cell
37	chr9:14275000-14282800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr9:14275200-14277200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr9:14275200-14277200	Weak transcription	Ovary	ovary
40	chr9:14275200-14277400	Enhancers	iPS-18 Cell Line	embryonic stem cell
41	chr9:14275200-14277400	Weak transcription	Brain Inferior Temporal Lobe	brain
42	chr9:14275200-14277600	Enhancers	iPS-20b Cell Line	embryonic stem cell
43	chr9:14275200-14278800	Enhancers	HUES48 Cell Line	embryonic stem cell
44	chr9:14275200-14279800	Enhancers	HUVEC	blood vessel
45	chr9:14275200-14280600	Enhancers	Fetal Heart	heart
46	chr9:14275400-14277000	Enhancers	NHEK	skin
47	chr9:14275400-14277200	Weak transcription	Brain Cingulate Gyrus	brain
48	chr9:14275600-14276400	Weak transcription	NHLF	lung
49	chr9:14275600-14277000	Weak transcription	HMEC	breast
50	chr9:14275600-14277200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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