Variant report

Variant	rs73647965
Chromosome Location	chr9:73809568-73809569
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs56101863	1.00[AMR][1000 genomes]
rs56137008	0.80[AFR][1000 genomes]
rs59733058	0.80[AFR][1000 genomes]
rs60150036	1.00[AMR][1000 genomes]
rs73647955	0.80[AFR][1000 genomes]
rs73647957	0.88[AFR][1000 genomes]
rs73647959	1.00[AMR][1000 genomes]
rs73647960	1.00[AMR][1000 genomes]
rs73647961	1.00[AMR][1000 genomes]
rs73647963	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73647964	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73647969	1.00[AMR][1000 genomes]
rs73647973	1.00[AMR][1000 genomes]
rs73647974	1.00[AMR][1000 genomes]
rs73647975	1.00[AMR][1000 genomes]
rs73647976	1.00[AMR][1000 genomes]
rs73647979	1.00[AMR][1000 genomes]
rs73647980	1.00[AMR][1000 genomes]
rs73647981	1.00[AMR][1000 genomes]
rs73647982	1.00[AMR][1000 genomes]
rs73647983	1.00[AMR][1000 genomes]
rs73647984	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035505	chr9:73709852-73934353	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv893442	chr9:73778502-74115344	Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv984559	chr9:73789685-73831841	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
4	nsv1052375	chr9:73793681-73893133	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv540152	chr9:73793681-73893133	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73809400-73809600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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