Variant report

Variant	rs73653634
Chromosome Location	chr9:97428412-97428413
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73653632	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73654261	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893596	chr9:97321172-97598966	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
2	nsv893597	chr9:97380597-97463435	Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:97424600-97431400	Enhancers	Fetal Intestine Large	intestine
2	chr9:97424600-97431400	Enhancers	Fetal Intestine Small	intestine
3	chr9:97427400-97428800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr9:97427400-97431200	Enhancers	Duodenum Mucosa	Duodenum
5	chr9:97428000-97428600	Flanking Active TSS	Liver	Liver
6	chr9:97428000-97429400	Enhancers	Pancreas	Pancrea
7	chr9:97428000-97430200	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr9:97428000-97431400	Weak transcription	HSMM	muscle
9	chr9:97428200-97429800	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr9:97428400-97428600	Enhancers	HSMMtube	muscle
11	chr9:97428400-97429400	Flanking Active TSS	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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