Variant report

Variant	rs73653733
Chromosome Location	chr9:101837509-101837510
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:28)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:28 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:101768904..101771612-chr9:101836295..101838610,2	K562	blood:
2	chr9:101757461..101761274-chr9:101835859..101838201,6	K562	blood:
3	chr9:101788010..101791486-chr9:101836576..101838981,4	K562	blood:
4	chr9:101719864..101722572-chr9:101836433..101838682,2	K562	blood:
5	chr9:101836496..101838149-chr9:101921084..101922742,2	K562	blood:
6	chr9:101773830..101775494-chr9:101836712..101838293,2	K562	blood:
7	chr9:101675886..101678175-chr9:101835652..101838631,2	K562	blood:
8	chr9:101614852..101617810-chr9:101836306..101838522,2	K562	blood:
9	chr9:101569127..101571118-chr9:101836993..101838662,2	K562	blood:
10	chr9:101571611..101574366-chr9:101836561..101838250,2	K562	blood:
11	chr9:101594752..101596934-chr9:101836815..101838508,2	K562	blood:
12	chr9:101828711..101831870-chr9:101834317..101838046,3	MCF-7	breast:
13	chr9:101625807..101630456-chr9:101833733..101838551,4	K562	blood:
14	chr9:101620048..101621808-chr9:101836159..101838047,2	K562	blood:
15	chr9:101835981..101841797-chr9:101884108..101889285,8	K562	blood:
16	chr9:101775783..101777327-chr9:101836304..101838650,2	K562	blood:
17	chr9:101748657..101752493-chr9:101836719..101838715,3	K562	blood:
18	chr9:101613892..101617810-chr9:101836029..101839366,3	K562	blood:
19	chr9:101782750..101786222-chr9:101835622..101838699,3	K562	blood:
20	chr9:101779201..101781779-chr9:101836297..101838506,2	K562	blood:
21	chr9:101749508..101753145-chr9:101836719..101839131,3	K562	blood:
22	chr9:101594094..101597495-chr9:101837008..101839345,3	K562	blood:
23	chr9:101601345..101603678-chr9:101836999..101839273,2	K562	blood:
24	chr9:101796455..101798562-chr9:101836494..101838693,2	K562	blood:
25	chr9:101757724..101761274-chr9:101835762..101837823,3	K562	blood:
26	chr9:101746159..101748228-chr9:101836720..101838665,2	K562	blood:
27	chr9:101834831..101839915-chr9:101875600..101879100,5	K562	blood:
28	chr9:101835256..101838008-chr9:101914700..101916909,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000119514	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs58844036	1.00[AFR][1000 genomes]
rs73653731	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893618	chr9:101800106-101886071	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv893619	chr9:101835165-101936231	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA target site	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:63 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101793800-101837600	Weak transcription	Psoas Muscle	Psoas
2	chr9:101816200-101844200	Weak transcription	Gastric	stomach
3	chr9:101822400-101837600	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr9:101822400-101838600	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr9:101826600-101848200	Weak transcription	Aorta	Aorta
6	chr9:101830000-101837600	Weak transcription	Rectal Smooth Muscle	rectum
7	chr9:101831200-101839000	Weak transcription	Colonic Mucosa	Colon
8	chr9:101831800-101838400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr9:101832200-101837600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
10	chr9:101832200-101837800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
11	chr9:101832200-101839200	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr9:101832600-101837600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
13	chr9:101833400-101837600	Weak transcription	Primary T cells from cord blood	blood
14	chr9:101834000-101839000	Weak transcription	Colon Smooth Muscle	Colon
15	chr9:101834600-101837600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr9:101834600-101837600	Weak transcription	Right Ventricle	heart
17	chr9:101834800-101837600	Weak transcription	Left Ventricle	heart
18	chr9:101834800-101839400	Weak transcription	Stomach Smooth Muscle	stomach
19	chr9:101835000-101837800	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr9:101835200-101837800	Weak transcription	Fetal Muscle Trunk	muscle
21	chr9:101835800-101838800	Weak transcription	Adipose Nuclei	Adipose
22	chr9:101835800-101838800	Weak transcription	Spleen	Spleen
23	chr9:101835800-101839000	Weak transcription	Fetal Stomach	stomach
24	chr9:101836200-101838400	Flanking Active TSS	K562	blood
25	chr9:101836600-101840200	Enhancers	Dnd41	blood
26	chr9:101836600-101842000	Enhancers	Primary T helper cells fromperipheralblood	blood
27	chr9:101836800-101840000	Enhancers	Primary hematopoietic stem cells short term culture	blood
28	chr9:101837000-101837600	Enhancers	Placenta Amnion	Placenta Amnion
29	chr9:101837000-101838000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr9:101837000-101838000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr9:101837000-101839200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
32	chr9:101837000-101839200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr9:101837000-101839400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr9:101837000-101839400	Enhancers	Muscle Satellite Cultured Cells	--
35	chr9:101837000-101839400	Enhancers	Fetal Muscle Leg	muscle
36	chr9:101837000-101839600	Enhancers	HSMMtube	muscle
37	chr9:101837000-101840200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
38	chr9:101837000-101840200	Enhancers	Fetal Thymus	thymus
39	chr9:101837000-101840400	Enhancers	Primary T cells fromperipheralblood	blood
40	chr9:101837000-101840400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr9:101837200-101838000	Enhancers	NH-A	brain
42	chr9:101837200-101838200	Enhancers	NHDF-Ad	bronchial
43	chr9:101837200-101838800	Enhancers	Primary T helper naive cells from peripheral blood	blood
44	chr9:101837200-101838800	Enhancers	Primary T helper cells PMA-I stimulated	--
45	chr9:101837200-101839200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr9:101837200-101839200	Enhancers	Fetal Heart	heart
47	chr9:101837200-101839200	Enhancers	Osteobl	bone
48	chr9:101837200-101839400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr9:101837200-101840400	Enhancers	Primary hematopoietic stem cells	blood
50	chr9:101837200-101840400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood

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