The 2.0 version of rSNPBase

Variant report

Variant rs73676911
Chromosome Location chr7:7773379-7773380
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:7737600-7778800 Weak transcription Primary hematopoietic stem cells blood
2 chr7:7752600-7790400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr7:7759000-7785800 Weak transcription Primary T helper cells fromperipheralblood blood
4 chr7:7759400-7791200 Weak transcription Esophagus oesophagus
5 chr7:7759600-7779000 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr7:7759600-7780000 Weak transcription Primary T cells from cord blood blood
7 chr7:7759600-7786800 Weak transcription Aorta Aorta
8 chr7:7759800-7776800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr7:7760800-7778400 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr7:7760800-7785200 Weak transcription Primary B cells from cord blood blood
11 chr7:7761000-7777800 Weak transcription Thymus Thymus
12 chr7:7767400-7776400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr7:7769200-7773800 Enhancers HepG2 liver
14 chr7:7770600-7773400 Enhancers Hela-S3 cervix
15 chr7:7771000-7773400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr7:7771000-7773600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr7:7771000-7773800 Enhancers Muscle Satellite Cultured Cells --
18 chr7:7771000-7773800 Enhancers HSMM muscle
19 chr7:7771000-7776400 Weak transcription Fetal Muscle Trunk muscle
20 chr7:7771000-7785600 Weak transcription Pancreas Pancrea
21 chr7:7771200-7785800 Weak transcription Fetal Intestine Small intestine
22 chr7:7771600-7775800 Weak transcription Fetal Muscle Leg muscle
23 chr7:7771600-7783000 Weak transcription Ovary ovary
24 chr7:7771600-7784800 Weak transcription Stomach Smooth Muscle stomach
25 chr7:7771600-7785400 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr7:7771600-7791000 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr7:7772000-7774200 Weak transcription HUVEC blood vessel
28 chr7:7772000-7786000 Weak transcription Brain Germinal Matrix brain
29 chr7:7772200-7775800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr7:7772200-7784800 Weak transcription Fetal Heart heart
31 chr7:7772400-7777200 Weak transcription Stomach Mucosa stomach
32 chr7:7772600-7773400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr7:7772800-7777400 Weak transcription Rectal Smooth Muscle rectum
34 chr7:7772800-7778600 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr7:7773000-7774600 Weak transcription Gastric stomach
36 chr7:7773000-7775800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr7:7773000-7776000 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr7:7773000-7777000 Weak transcription A549 lung
39 chr7:7773000-7777400 Weak transcription Colon Smooth Muscle Colon
40 chr7:7773000-7778800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr7:7773000-7802000 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr7:7773200-7775800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr7:7773200-7776000 Weak transcription HSMMtube muscle
44 chr7:7773200-7777400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr7:7773200-7778200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr7:7773200-7778200 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015