Variant report

Variant	rs73683021
Chromosome Location	chr8:63115044-63115045
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs56158875	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56859587	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57963179	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58165428	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58819717	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59574888	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59720904	1.00[AMR][1000 genomes]
rs59899302	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60198522	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60249107	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60425003	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60453695	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60926640	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61190800	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61575867	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683010	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683011	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683013	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683014	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683015	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683017	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683018	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683019	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683020	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683022	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683024	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683025	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683026	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683027	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73683028	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016883	chr8:63110741-63171354	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1030749	chr8:63114461-63156246	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63113600-63115600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:63115000-63115800	Enhancers	Brain Germinal Matrix	brain

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