Variant report

Variant	rs73685718
Chromosome Location	chr8:62006032-62006033
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73264719	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948922	chr8:61818964-62475097	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	nsv465697	chr8:61963699-62025948	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv611425	chr8:61963699-62025948	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:61998600-62008000	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr8:62005400-62006200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:62005600-62006400	Weak transcription	Esophagus	oesophagus
4	chr8:62005600-62006800	Enhancers	Fetal Heart	heart
5	chr8:62005600-62007400	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr8:62005800-62006200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr8:62005800-62007000	Enhancers	Brain Germinal Matrix	brain
8	chr8:62006000-62006400	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr8:62006000-62006400	Enhancers	Pancreatic Islets	Pancreatic Islet
10	chr8:62006000-62006600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr8:62006000-62006600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr8:62006000-62006800	Enhancers	Brain Anterior Caudate	brain
13	chr8:62006000-62007200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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