Variant report

Variant	rs73688670
Chromosome Location	chr8:86022544-86022545
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:86019642..86022223-chr8:86022348..86025205,2	K562	blood:

Variant related genes	Relation type
ENSG00000133739	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16913589	0.89[AFR][1000 genomes]
rs16913598	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3481417	chr8:85279453-86145229	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	esv3481418	chr8:85279453-86145229	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
3	nsv1033160	chr8:86010643-86030560	Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:86020000-86024400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:86020000-86057400	Weak transcription	Small Intestine	intestine
3	chr8:86020200-86024200	Weak transcription	HSMM	muscle
4	chr8:86020200-86024600	Weak transcription	Fetal Muscle Trunk	muscle
5	chr8:86020200-86024600	Weak transcription	Ovary	ovary
6	chr8:86020200-86025800	Weak transcription	Right Ventricle	heart
7	chr8:86020200-86032600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr8:86020200-86042200	Weak transcription	Left Ventricle	heart
9	chr8:86020400-86032400	Weak transcription	Fetal Thymus	thymus
10	chr8:86020400-86034400	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr8:86020400-86043800	Weak transcription	NH-A	brain
12	chr8:86020400-86044400	Weak transcription	Fetal Muscle Leg	muscle
13	chr8:86020400-86048400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr8:86020400-86048400	Weak transcription	Fetal Stomach	stomach
15	chr8:86020400-86049000	Weak transcription	Primary B cells from peripheral blood	blood
16	chr8:86020400-86054800	Weak transcription	Lung	lung
17	chr8:86020400-86055400	Weak transcription	Fetal Kidney	kidney
18	chr8:86020400-86055400	Weak transcription	Sigmoid Colon	Sigmoid Colon
19	chr8:86020400-86056400	Weak transcription	Gastric	stomach
20	chr8:86020400-86057400	Weak transcription	Aorta	Aorta
21	chr8:86020400-86062600	Weak transcription	Pancreas	Pancrea
22	chr8:86020600-86024800	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr8:86020600-86026200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
24	chr8:86020600-86029400	Weak transcription	Primary T cells fromperipheralblood	blood
25	chr8:86020600-86031800	Weak transcription	Primary hematopoietic stem cells	blood
26	chr8:86020600-86031800	Weak transcription	HMEC	breast
27	chr8:86020600-86032000	Weak transcription	NHEK	skin
28	chr8:86020600-86032400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr8:86020600-86034400	Weak transcription	Liver	Liver
30	chr8:86020600-86039200	Weak transcription	Adipose Nuclei	Adipose
31	chr8:86020600-86041600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
32	chr8:86020600-86044200	Weak transcription	Primary T cells from cord blood	blood
33	chr8:86020600-86045800	Weak transcription	Thymus	Thymus
34	chr8:86020600-86048800	Weak transcription	Primary monocytes fromperipheralblood	blood
35	chr8:86020600-86049000	Weak transcription	Monocytes-CD14+_RO01746	blood
36	chr8:86020600-86049200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr8:86020600-86052400	Weak transcription	Brain Cingulate Gyrus	brain
38	chr8:86020600-86054600	Weak transcription	Stomach Smooth Muscle	stomach
39	chr8:86020600-86058800	Weak transcription	Rectal Smooth Muscle	rectum
40	chr8:86020800-86023400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
41	chr8:86020800-86023400	Weak transcription	NHLF	lung
42	chr8:86020800-86024800	Weak transcription	Duodenum Smooth Muscle	Duodenum
43	chr8:86020800-86025000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
44	chr8:86020800-86039000	Weak transcription	Brain Hippocampus Middle	brain
45	chr8:86020800-86050600	Weak transcription	Brain Angular Gyrus	brain
46	chr8:86021000-86023600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr8:86021000-86024800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr8:86021000-86028600	Weak transcription	Fetal Heart	heart
49	chr8:86021000-86032000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr8:86021000-86034400	Weak transcription	Fetal Lung	lung

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