Variant report

Variant	rs73689607
Chromosome Location	chr8:85021463-85021464
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10088407	1.00[AMR][1000 genomes]
rs10093509	1.00[AMR][1000 genomes]
rs10096837	1.00[AMR][1000 genomes]
rs57108863	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7006199	1.00[AMR][1000 genomes]
rs73302441	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73689624	0.83[AFR][1000 genomes]
rs7825336	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753846	chr8:84637092-85239703	Active TSS Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:85020400-85021800	Enhancers	Duodenum Mucosa	Duodenum
2	chr8:85020600-85021800	Enhancers	Brain Germinal Matrix	brain
3	chr8:85021000-85022200	Enhancers	Fetal Intestine Large	intestine
4	chr8:85021400-85022000	Weak transcription	Fetal Intestine Small	intestine
5	chr8:85021400-85022200	Enhancers	Pancreatic Islets	Pancreatic Islet

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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