Variant report

Variant	rs736898
Chromosome Location	chr22:22711786-22711787
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MXI1	chr22:22711766-22711830	GM12878	blood:	n/a	n/a
2	CTCF	chr22:22711640-22711973	GM12892	blood:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
3	CTCF	chr22:22711740-22711890	GM12869	blood:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
4	POLR2A	chr22:22711715-22712169	K562	blood:	n/a	n/a
5	TCF12	chr22:22711727-22711994	GM12878	blood:	n/a	n/a
6	CTCF	chr22:22711740-22711890	HCT-116	colon:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
7	PAX5	chr22:22711610-22712021	GM12892	blood:	n/a	chr22:22711633-22711651
8	EP300	chr22:22711718-22711871	K562	blood:	n/a	n/a
9	CTCF	chr22:22711639-22711988	IMR90	lung:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
10	CTCF	chr22:22711670-22711954	GM12878	blood:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
11	RAD21	chr22:22711666-22711944	A549	lung:	n/a	chr22:22711807-22711826
12	HMGN3	chr22:22711581-22711928	K562	blood:	n/a	n/a
13	CTCF	chr22:22711720-22711870	BJ	skin:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
14	RAD21	chr22:22711566-22712093	MCF-7	breast:	n/a	chr22:22711807-22711826
15	CTCF	chr22:22711720-22711870	HRE	kidney:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
16	JUN	chr22:22710680-22712168	K562	blood:	n/a	chr22:22710874-22710881
17	CTCF	chr22:22711720-22711870	HPAF	blood vessel:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
18	CTCF	chr22:22711740-22711890	HRPEpiC	eye:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
19	ATF3	chr22:22711498-22712188	K562	blood:	n/a	n/a
20	USF1	chr22:22711536-22711941	H1-hESC	embryonic stem cell:	n/a	chr22:22711772-22711783
21	MAX	chr22:22711632-22711973	K562	blood:	n/a	n/a
22	CTCF	chr22:22711646-22711939	LNCaP	prostate:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
23	CTCF	chr22:22711651-22711968	MCF-7	breast:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
24	CTCF	chr22:22711760-22711910	Caco-2	colon:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
25	CTCF	chr22:22711740-22711890	HPAF	blood vessel:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
26	CTCF	chr22:22711720-22711870	AG04450	lung:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
27	CTCF	chr22:22711610-22711867	A549	lung:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
28	USF2	chr22:22711598-22711973	Hela-S3	cervix:	n/a	chr22:22711772-22711783
29	RAD21	chr22:22711637-22711997	Hela-S3	cervix:	n/a	chr22:22711807-22711826
30	ATF3	chr22:22711612-22711939	K562	blood:	n/a	n/a
31	CTCF	chr22:22711700-22711850	GM12869	blood:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
32	RAD21	chr22:22711581-22712022	K562	blood:	n/a	chr22:22711807-22711826
33	PAX5	chr22:22711705-22711956	GM12878	blood:	n/a	n/a
34	CTCF	chr22:22711740-22711890	HRE	kidney:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
35	YY1	chr22:22711643-22711904	GM12878	blood:	n/a	n/a
36	USF1	chr22:22711577-22711874	A549	lung:	n/a	chr22:22711772-22711783
37	CTCF	chr22:22711700-22711850	GM06990	blood:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
38	CBX3	chr22:22711368-22712031	K562	blood:	n/a	n/a
39	HDAC2	chr22:22711038-22711994	K562	blood:	n/a	n/a
40	CTCF	chr22:22711621-22712017	GM12878	blood:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
41	CTCF	chr22:22711615-22711988	GM19240	blood:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
42	USF1	chr22:22711593-22711884	SK-N-SH_RA	brain:	n/a	chr22:22711772-22711783
43	CTCF	chr22:22711687-22711887	SK-N-SH_RA	brain:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
44	CTCF	chr22:22711740-22711890	K562	blood:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
45	CTCF	chr22:22711562-22711930	H1-hESC	embryonic stem cell:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
46	CTCF	chr22:22711660-22711810	WI-38	lung:	n/a	n/a
47	USF2	chr22:22711555-22711958	H1-hESC	embryonic stem cell:	n/a	chr22:22711772-22711783
48	USF1	chr22:22711584-22711903	A549	lung:	n/a	chr22:22711772-22711783
49	CTCF	chr22:22711720-22711870	AG04449	skin:	n/a	chr22:22711808-22711829 chr22:22711811-22711821 chr22:22711806-22711824 chr22:22711807-22711823
50	USF1	chr22:22711628-22711886	A549	lung:	n/a	chr22:22711772-22711783

No.	Distal block	Cell Line	Cell type
1	chr22:22711292..22712288-chr22:22763758..22764875,4	K562	blood:
2	chr22:22696477..22698060-chr22:22710853..22711858,5	K562	blood:
3	chr22:22711346..22712290-chr22:22785578..22786510,3	K562	blood:
4	chr22:22549882..22550785-chr22:22711315..22712247,3	K562	blood:
5	chr22:22711737..22712260-chr22:22725162..22725967,2	K562	blood:
6	chr22:22711677..22712315-chr22:22734391..22735319,2	K562	blood:
7	chr22:22711086..22713329-chr22:22894770..22898200,3	K562	blood:

Variant related genes	Relation type
IGLV1-47	TF binding region
ENSG00000185686	Chromatin interaction
ENSG00000211653	Chromatin interaction
ENSG00000211640	Chromatin interaction
ENSG00000223350	Chromatin interaction
ENSG00000232603	Chromatin interaction
ENSG00000211655	Chromatin interaction
ENSG00000211651	Chromatin interaction

Extended variants
information (count: 371 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs1015182	0.86[ASN][1000 genomes]
rs1015183	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs1034362	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.86[TSI][hapmap];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12169829	0.93[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12484335	0.91[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs1573599	0.87[ASN][1000 genomes]
rs17493184	0.91[CHB][hapmap];0.90[JPT][hapmap]
rs17493443	1.00[CHB][hapmap];0.92[JPT][hapmap];0.93[ASN][1000 genomes]
rs17578276	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17578409	0.94[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.93[TSI][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1988718	0.90[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2051499	0.93[ASN][1000 genomes]
rs2051500	0.93[ASN][1000 genomes]
rs2078662	0.86[ASN][1000 genomes]
rs2213144	0.86[ASN][1000 genomes]
rs2213150	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs2330106	0.86[ASN][1000 genomes]
rs2330107	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs2330109	0.86[ASN][1000 genomes]
rs2330110	0.86[ASN][1000 genomes]
rs2877051	0.86[ASN][1000 genomes]
rs35779014	0.84[ASN][1000 genomes]
rs36084829	0.88[ASN][1000 genomes]
rs3753077	0.81[ASN][1000 genomes]
rs3753078	0.88[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs4413251	0.86[ASN][1000 genomes]
rs4821951	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs4821952	0.90[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs4821954	0.86[ASN][1000 genomes]
rs4821955	0.86[ASN][1000 genomes]
rs4821958	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs5750955	0.86[ASN][1000 genomes]
rs5750962	0.86[ASN][1000 genomes]
rs5750963	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs5750965	0.86[ASN][1000 genomes]
rs5757973	0.88[ASN][1000 genomes]
rs5757982	0.86[ASN][1000 genomes]
rs5757986	0.86[ASN][1000 genomes]
rs5757987	0.86[ASN][1000 genomes]
rs5757988	0.86[ASN][1000 genomes]
rs5757999	0.90[CHB][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs5758005	0.86[ASN][1000 genomes]
rs5758009	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs5758010	0.90[CHB][hapmap];0.85[JPT][hapmap];0.85[ASN][1000 genomes]
rs5995854	0.87[CEU][hapmap];0.83[CHB][hapmap]
rs6001967	0.90[CHB][hapmap];0.92[JPT][hapmap];0.85[ASN][1000 genomes]
rs62224968	0.91[ASN][1000 genomes]
rs62224970	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62224971	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62224972	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62224987	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73153800	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73153802	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs962017	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs9623370	0.91[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9623377	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9623378	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9623379	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9623381	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:312 , 50 per page) page: 1 2 3 4 5 6 7

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1063962	chr22:21939722-22934593	Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	477 gene(s)	inside rSNPs	diseases
2	nsv1058617	chr22:21939922-22934454	Weak transcription Bivalent Enhancer Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	477 gene(s)	inside rSNPs	diseases
3	nsv529694	chr22:21957411-22905068	Enhancers Genic enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	474 gene(s)	inside rSNPs	diseases
4	nsv531797	chr22:21977700-22959729	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	476 gene(s)	inside rSNPs	diseases
5	nsv948580	chr22:22100718-22839559	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
6	esv2422403	chr22:22152248-23112582	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
7	esv2422390	chr22:22157964-23112582	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
8	esv2422372	chr22:22198324-22731587	Strong transcription Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	79 gene(s)	inside rSNPs	diseases
9	esv2422362	chr22:22198357-23125553	Enhancers Strong transcription Genic enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
10	esv2422446	chr22:22198357-23127963	Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
11	esv2422217	chr22:22217341-23120076	Genic enhancers Enhancers Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
12	esv2422343	chr22:22298025-23112582	Bivalent Enhancer Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
13	nsv432178	chr22:22307519-23222208	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	160 gene(s)	inside rSNPs	diseases
14	nsv432179	chr22:22307519-23288012	Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	170 gene(s)	inside rSNPs	diseases
15	nsv9875	chr22:22312880-23277895	Strong transcription Bivalent Enhancer Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	167 gene(s)	inside rSNPs	diseases
16	nsv1063653	chr22:22312927-23087293	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	129 gene(s)	inside rSNPs	diseases
17	nsv1061533	chr22:22312927-23097377	Strong transcription Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	132 gene(s)	inside rSNPs	diseases
18	nsv1063119	chr22:22313127-23087154	Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	129 gene(s)	inside rSNPs	diseases
19	nsv1060418	chr22:22313127-23097238	Weak transcription Bivalent Enhancer Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	132 gene(s)	inside rSNPs	diseases
20	nsv1060595	chr22:22313127-23122548	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	133 gene(s)	inside rSNPs	diseases
21	nsv1057610	chr22:22313127-23245889	Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases
22	nsv1066111	chr22:22315077-23099160	Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	130 gene(s)	inside rSNPs	diseases
23	esv2755411	chr22:22322138-23149622	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
24	esv2756590	chr22:22322138-23222208	Bivalent Enhancer Bivalent/Poised TSS Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
25	nsv432183	chr22:22322138-23222208	Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
26	nsv526328	chr22:22328391-22911060	Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
27	esv2755870	chr22:22332876-23222208	Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
28	nsv459421	chr22:22336512-22911060	Active TSS Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
29	nsv588348	chr22:22336512-22911060	Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
30	esv2753191	chr22:22343054-23157485	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	142 gene(s)	inside rSNPs	diseases
31	esv2755227	chr22:22343336-23157485	Bivalent Enhancer Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	142 gene(s)	inside rSNPs	diseases
32	esv2754921	chr22:22353066-23278593	Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	164 gene(s)	inside rSNPs	diseases
33	nsv3567	chr22:22375862-23272265	Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	164 gene(s)	inside rSNPs	diseases
34	esv2752535	chr22:22379067-22952239	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
35	esv2753011	chr22:22381768-23157485	Strong transcription Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	142 gene(s)	inside rSNPs	diseases
36	nsv588355	chr22:22384041-23111861	Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	129 gene(s)	inside rSNPs	diseases
37	nsv459426	chr22:22384041-23240027	Enhancers Strong transcription Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
38	nsv459427	chr22:22384041-23240027	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
39	nsv588356	chr22:22384041-23240027	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
40	esv3449995	chr22:22384825-23247356	Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
41	nsv1055761	chr22:22386434-23035233	Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
42	esv2755658	chr22:22386434-23222208	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	156 gene(s)	inside rSNPs	diseases
43	esv2756635	chr22:22386434-23222208	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	156 gene(s)	inside rSNPs	diseases
44	nsv1060460	chr22:22386434-23222279	ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	156 gene(s)	inside rSNPs	diseases
45	nsv1061057	chr22:22386434-23223233	Strong transcription Bivalent Enhancer Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	156 gene(s)	inside rSNPs	diseases
46	nsv459430	chr22:22386617-23127585	Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	130 gene(s)	inside rSNPs	diseases
47	nsv459431	chr22:22386617-23224835	Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
48	nsv588359	chr22:22386617-23224835	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
49	nsv459432	chr22:22386617-23234792	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	158 gene(s)	inside rSNPs	diseases
50	nsv459433	chr22:22386617-23240027	Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	162 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs736898	LOC96610	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:22703800-22725200	Weak transcription	Right Atrium	heart
2	chr22:22707400-22716800	Weak transcription	Primary hematopoietic stem cells	blood
3	chr22:22711200-22711800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
4	chr22:22711200-22711800	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
5	chr22:22711200-22712200	Bivalent Enhancer	Fetal Muscle Leg	muscle
6	chr22:22711400-22711800	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
7	chr22:22711400-22711800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
8	chr22:22711400-22711800	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr22:22711400-22711800	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
10	chr22:22711400-22711800	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
11	chr22:22711400-22711800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr22:22711400-22711800	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr22:22711400-22711800	Active TSS	Brain Angular Gyrus	brain
14	chr22:22711400-22711800	Flanking Active TSS	Brain Hippocampus Middle	brain
15	chr22:22711400-22711800	Active TSS	Brain Substantia Nigra	brain
16	chr22:22711400-22711800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
17	chr22:22711400-22711800	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
18	chr22:22711400-22711800	Bivalent Enhancer	Stomach Mucosa	stomach
19	chr22:22711400-22711800	Enhancers	GM12878-XiMat	blood
20	chr22:22711400-22712000	Flanking Active TSS	Primary B cells from cord blood	blood
21	chr22:22711400-22712000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
22	chr22:22711400-22712200	Enhancers	Fetal Intestine Small	intestine
23	chr22:22711400-22712200	Bivalent Enhancer	Placenta	Placenta
24	chr22:22711600-22711800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
25	chr22:22711600-22711800	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr22:22711600-22711800	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
27	chr22:22711600-22711800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
28	chr22:22711600-22711800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
29	chr22:22711600-22711800	Flanking Active TSS	Primary B cells from peripheral blood	blood
30	chr22:22711600-22711800	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
31	chr22:22711600-22711800	Bivalent Enhancer	Primary T regulatory cells fromperipheralblood	blood
32	chr22:22711600-22711800	Bivalent Enhancer	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr22:22711600-22711800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr22:22711600-22711800	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr22:22711600-22711800	Enhancers	Liver	Liver
36	chr22:22711600-22711800	Bivalent Enhancer	Brain Cingulate Gyrus	brain
37	chr22:22711600-22711800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
38	chr22:22711600-22711800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
39	chr22:22711600-22711800	Flanking Active TSS	Fetal Intestine Large	intestine
40	chr22:22711600-22711800	Bivalent Enhancer	Left Ventricle	heart
41	chr22:22711600-22711800	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
42	chr22:22711600-22711800	Bivalent Enhancer	Stomach Smooth Muscle	stomach
43	chr22:22711600-22711800	Flanking Bivalent TSS/Enh	Dnd41	blood
44	chr22:22711600-22712000	Enhancers	Breast Myoepithelial Primary Cells	Breast
45	chr22:22711600-22712000	Enhancers	Primary monocytes fromperipheralblood	blood

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