Variant report

Variant	rs73691267
Chromosome Location	chr8:66958385-66958386
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs16932444	0.99[AFR][1000 genomes]
rs60292147	0.85[AMR][1000 genomes]
rs73691264	0.85[AMR][1000 genomes]
rs73691266	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs7836629	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66954600-66960200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr8:66956000-66960400	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr8:66956400-66960000	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr8:66956400-66960400	Weak transcription	Psoas Muscle	Psoas
5	chr8:66957400-66958600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:66957800-66959600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr8:66957800-66960200	Enhancers	Placenta	Placenta
8	chr8:66958000-66958400	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr8:66958000-66958400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr8:66958000-66958400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr8:66958000-66958600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr8:66958000-66958600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr8:66958200-66958400	Enhancers	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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