Variant report

Variant	rs73693951
Chromosome Location	chr8:67132867-67132868
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:67129093..67131723-chr8:67132358..67134576,2	MCF-7	breast:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10099805	1.00[AMR][1000 genomes]
rs73691520	1.00[AMR][1000 genomes]
rs73693945	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693946	1.00[AMR][1000 genomes]
rs73693947	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67116800-67135200	Weak transcription	Placenta	Placenta
2	chr8:67118400-67133400	Weak transcription	Liver	Liver
3	chr8:67119600-67135400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:67124600-67133000	Weak transcription	Pancreas	Pancrea
5	chr8:67129400-67133800	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr8:67129600-67133000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr8:67129600-67133600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr8:67130400-67133200	Enhancers	Brain Anterior Caudate	brain
9	chr8:67130800-67135800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr8:67131400-67133800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr8:67131600-67133200	Enhancers	Fetal Muscle Leg	muscle
12	chr8:67131600-67133400	Enhancers	Fetal Brain Female	brain
13	chr8:67131600-67133400	Enhancers	Fetal Kidney	kidney
14	chr8:67132000-67135800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr8:67132200-67133000	Enhancers	Fetal Heart	heart
16	chr8:67132200-67137600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr8:67132400-67133200	Enhancers	Left Ventricle	heart
18	chr8:67132600-67133200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr8:67132600-67133200	Weak transcription	Lung	lung
20	chr8:67132600-67135800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr8:67132800-67133200	Enhancers	Fetal Muscle Trunk	muscle
22	chr8:67132800-67133400	Enhancers	Brain Inferior Temporal Lobe	brain

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