Variant report
| Variant | rs73695447 |
|---|---|
| Chromosome Location | chr8:96289675-96289676 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000156172 | Chromatin interaction |
| ENSG00000253773 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:9)
| rs_ID | r2[population] |
|---|---|
| rs73695433 | 0.87[AFR][1000 genomes] |
| rs73695435 | 0.87[AFR][1000 genomes] |
| rs73695436 | 0.87[AFR][1000 genomes] |
| rs73695437 | 0.87[AFR][1000 genomes] |
| rs73695438 | 0.87[AFR][1000 genomes] |
| rs73695439 | 0.87[AFR][1000 genomes] |
| rs73695442 | 1.00[AFR][1000 genomes] |
| rs7814173 | 0.87[AFR][1000 genomes] |
| rs7815085 | 0.87[AFR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1023866 | chr8:96273255-96306378 | Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 25 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
