Variant report

Variant	rs73701665
Chromosome Location	chr8:118056103-118056104
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs16888901	1.00[AMR][1000 genomes]
rs16888946	1.00[AMR][1000 genomes]
rs16889172	1.00[AMR][1000 genomes]
rs16889211	1.00[AMR][1000 genomes]
rs73310218	1.00[AMR][1000 genomes]
rs73310237	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530386	chr8:117509968-118391406	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv1027920	chr8:117983619-118079816	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv539732	chr8:117983619-118079816	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv1032976	chr8:118032075-118065907	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118052600-118056600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:118053200-118056600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:118053400-118056800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr8:118053600-118056600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:118053600-118056600	Weak transcription	HSMM	muscle
6	chr8:118053800-118056200	Weak transcription	Colon Smooth Muscle	Colon
7	chr8:118053800-118056600	Weak transcription	Rectal Smooth Muscle	rectum
8	chr8:118054000-118056600	Weak transcription	Fetal Muscle Trunk	muscle
9	chr8:118054000-118056600	Weak transcription	Fetal Muscle Leg	muscle
10	chr8:118054200-118056400	Weak transcription	NHDF-Ad	bronchial
11	chr8:118054200-118056600	Weak transcription	HSMMtube	muscle
12	chr8:118054800-118056400	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr8:118054800-118056800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr8:118055400-118056400	Enhancers	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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