Variant report

Variant	rs73703664
Chromosome Location	chr8:124813851-124813852
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:124792430..124794723-chr8:124811717..124815050,3	MCF-7	breast:
2	chr8:124812507..124814669-chr8:124816701..124818733,2	K562	blood:
3	chr8:124780215..124782108-chr8:124812179..124814853,2	MCF-7	breast:
4	chr8:124807128..124809976-chr8:124813752..124817670,3	K562	blood:
5	chr11:65197972..65198491-chr8:124813387..124814082,2	Hela-S3	cervix:

Variant related genes	Relation type
ENSG00000176853	Chromatin interaction

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs59400236	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7007309	0.93[AFR][1000 genomes]
rs73703656	0.93[AFR][1000 genomes]
rs73703661	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73703666	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831451	chr8:124710946-124885148	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv972575	chr8:124810138-124821383	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124785400-124815000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:124785600-124815000	Strong transcription	Duodenum Mucosa	Duodenum
3	chr8:124785800-124829000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr8:124786000-124825200	Strong transcription	Fetal Thymus	thymus
5	chr8:124786200-124814400	Strong transcription	HSMM	muscle
6	chr8:124786200-124815200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr8:124786200-124815400	Strong transcription	Dnd41	blood
8	chr8:124786200-124825200	Strong transcription	HUES64 Cell Line	embryonic stem cell
9	chr8:124786400-124815000	Strong transcription	HUES6 Cell Line	embryonic stem cell
10	chr8:124786400-124815200	Strong transcription	Rectal Mucosa Donor 29	rectum
11	chr8:124786400-124827200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
12	chr8:124786800-124814600	Strong transcription	Placenta	Placenta
13	chr8:124787000-124816400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr8:124787000-124822800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr8:124787000-124827000	Strong transcription	Primary T helper cells fromperipheralblood	blood
16	chr8:124787400-124814400	Strong transcription	A549	lung
17	chr8:124787600-124818800	Strong transcription	Liver	Liver
18	chr8:124789200-124824600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
19	chr8:124789400-124814800	Strong transcription	Primary T cells fromperipheralblood	blood
20	chr8:124789400-124821600	Weak transcription	Stomach Mucosa	stomach
21	chr8:124789400-124825200	Strong transcription	Rectal Mucosa Donor 31	rectum
22	chr8:124789800-124827400	Strong transcription	Primary T helper cells PMA-I stimulated	--
23	chr8:124790000-124827800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr8:124790200-124828600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr8:124790600-124814800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr8:124790800-124814400	Strong transcription	Osteobl	bone
27	chr8:124790800-124815800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr8:124790800-124825200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
29	chr8:124791000-124828600	Strong transcription	Primary B cells from cord blood	blood
30	chr8:124791000-124828600	Strong transcription	Primary B cells from peripheral blood	blood
31	chr8:124791200-124814200	Strong transcription	Duodenum Smooth Muscle	Duodenum
32	chr8:124791200-124815000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr8:124791200-124815800	Strong transcription	Adipose Nuclei	Adipose
34	chr8:124791200-124828600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr8:124791200-124828600	Strong transcription	Primary monocytes fromperipheralblood	blood
36	chr8:124791200-124829000	Strong transcription	Primary neutrophils fromperipheralblood	blood
37	chr8:124791200-124829200	Strong transcription	Monocytes-CD14+_RO01746	blood
38	chr8:124791400-124814000	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
39	chr8:124791400-124816000	Strong transcription	Primary T cells from cord blood	blood
40	chr8:124792200-124815600	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
41	chr8:124793400-124814600	Strong transcription	Fetal Intestine Large	intestine
42	chr8:124793400-124815800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr8:124793600-124814800	Strong transcription	Fetal Muscle Trunk	muscle
44	chr8:124793600-124815800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
45	chr8:124793800-124815400	Strong transcription	Left Ventricle	heart
46	chr8:124793800-124815800	Strong transcription	Fetal Muscle Leg	muscle
47	chr8:124794200-124825000	Strong transcription	Primary hematopoietic stem cells	blood
48	chr8:124795600-124815600	Strong transcription	GM12878-XiMat	blood
49	chr8:124797800-124826000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr8:124798400-124826400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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