Variant report

Variant	rs73703802
Chromosome Location	chr8:124322718-124322719
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11987869	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55905385	0.88[AMR][1000 genomes]
rs57116079	0.88[AMR][1000 genomes]
rs7017197	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529364	chr8:123763846-124373809	Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
2	nsv1015249	chr8:124103504-124373949	Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
3	nsv539741	chr8:124103504-124373949	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
4	nsv831449	chr8:124276685-124471740	Weak transcription Active TSS Genic enhancers Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124321600-124331000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr8:124321600-124334000	Weak transcription	Ovary	ovary
3	chr8:124321800-124323000	Weak transcription	Adipose Nuclei	Adipose
4	chr8:124322200-124323000	Flanking Active TSS	GM12878-XiMat	blood
5	chr8:124322200-124323400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr8:124322400-124322800	Active TSS	Primary T regulatory cells fromperipheralblood	blood
7	chr8:124322400-124323400	Enhancers	HMEC	breast
8	chr8:124322400-124323400	Flanking Active TSS	NHEK	skin
9	chr8:124322600-124323000	Weak transcription	Fetal Kidney	kidney
10	chr8:124322600-124323200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr8:124322600-124334400	Weak transcription	Primary T helper cells PMA-I stimulated	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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