Variant report

Variant	rs73703908
Chromosome Location	chr8:125066985-125066986
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs6987738	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6992212	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73703907	1.00[AMR][1000 genomes]
rs73703917	0.83[AFR][1000 genomes]
rs73706366	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv6375	chr8:125056543-125087258	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv612144	chr8:125057728-125206503	Enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv1023183	chr8:125060532-125206445	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125052600-125083600	Weak transcription	Gastric	stomach
2	chr8:125064400-125078600	Weak transcription	Stomach Mucosa	stomach
3	chr8:125064800-125067000	Enhancers	Fetal Muscle Leg	muscle
4	chr8:125065200-125067200	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr8:125065400-125067000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr8:125065400-125067000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr8:125065400-125067200	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:125065800-125067400	Bivalent Enhancer	NHDF-Ad	bronchial
9	chr8:125066000-125067000	Weak transcription	Psoas Muscle	Psoas
10	chr8:125066200-125067400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr8:125066200-125071600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr8:125066400-125068000	Weak transcription	Fetal Stomach	stomach
13	chr8:125066800-125067000	Enhancers	Placenta	Placenta
14	chr8:125066800-125068000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr8:125066800-125068600	Enhancers	Primary hematopoietic stem cells short term culture	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links