Variant report

Variant	rs73706730
Chromosome Location	chr8:121723269-121723270
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:121721252..121724174-chr8:121726884..121729433,3	MCF-7	breast:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs58509927	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59065802	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61541466	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73706732	0.82[AFR][1000 genomes]
rs73708637	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73710016	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016172	chr8:121679590-121929916	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv891422	chr8:121680857-121819478	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:121712800-121724400	Enhancers	Primary T helper cells fromperipheralblood	blood
2	chr8:121714800-121729400	Weak transcription	Right Atrium	heart
3	chr8:121715000-121728200	Weak transcription	Psoas Muscle	Psoas
4	chr8:121716200-121726200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr8:121716200-121726200	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr8:121719400-121736600	Weak transcription	HSMM	muscle
7	chr8:121719600-121724000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
8	chr8:121719600-121724400	Enhancers	Primary T cells from cord blood	blood
9	chr8:121719600-121736400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr8:121719600-121739000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
11	chr8:121719800-121729400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr8:121720000-121727000	Weak transcription	Monocytes-CD14+_RO01746	blood
13	chr8:121720000-121729400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr8:121720200-121723600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr8:121720200-121726800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr8:121720800-121723800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr8:121720800-121724200	Enhancers	Primary T helper cells PMA-I stimulated	--
18	chr8:121720800-121724400	Enhancers	HepG2	liver
19	chr8:121721000-121724000	Enhancers	Primary T helper naive cells from peripheral blood	blood
20	chr8:121721200-121723800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr8:121721200-121723800	Enhancers	HUVEC	blood vessel
22	chr8:121721200-121724000	Enhancers	Primary T killer memory cells from peripheral blood	blood
23	chr8:121721400-121723400	ZNF genes & repeats	Primary hematopoietic stem cells	blood
24	chr8:121721600-121723400	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
25	chr8:121722000-121724000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
26	chr8:121722200-121723800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
27	chr8:121722200-121723800	Enhancers	Placenta	Placenta
28	chr8:121722200-121724000	Enhancers	Primary T cells fromperipheralblood	blood
29	chr8:121722600-121724400	Enhancers	Liver	Liver
30	chr8:121722800-121737000	Weak transcription	Primary monocytes fromperipheralblood	blood
31	chr8:121723000-121723600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr8:121723000-121723600	Weak transcription	Lung	lung
33	chr8:121723000-121728000	Weak transcription	Spleen	Spleen
34	chr8:121723000-121729600	Weak transcription	Left Ventricle	heart
35	chr8:121723000-121730800	Weak transcription	Primary B cells from peripheral blood	blood
36	chr8:121723000-121731400	Weak transcription	Fetal Thymus	thymus
37	chr8:121723000-121734200	Weak transcription	Aorta	Aorta
38	chr8:121723200-121723800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood

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