Variant report

Variant	rs73707582
Chromosome Location	chr8:122274648-122274649
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:122274556..122277395-chr8:122543323..122546283,2	MCF-7	breast:

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs16894980	0.87[EUR][1000 genomes]
rs59391888	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7006513	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs73707573	0.95[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs73707574	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73707577	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73707589	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891424	chr8:121873345-122393258	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv1844734	chr8:121928250-122283585	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv3330574	chr8:122039099-122386130	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv891426	chr8:122078334-122393258	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122271800-122275600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr8:122272200-122275800	Enhancers	Fetal Lung	lung
3	chr8:122272200-122276200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr8:122272200-122276200	Enhancers	Fetal Stomach	stomach
5	chr8:122272800-122275400	Enhancers	Fetal Muscle Leg	muscle
6	chr8:122273400-122275200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr8:122273400-122275400	Enhancers	HSMM	muscle
8	chr8:122273400-122275400	Enhancers	HUVEC	blood vessel
9	chr8:122273400-122276400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr8:122273400-122277400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr8:122273400-122277600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr8:122273600-122274800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr8:122273600-122275000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr8:122273800-122274800	Enhancers	Muscle Satellite Cultured Cells	--
15	chr8:122273800-122274800	Weak transcription	HMEC	breast
16	chr8:122273800-122274800	Weak transcription	NHEK	skin
17	chr8:122273800-122275000	Weak transcription	HUES6 Cell Line	embryonic stem cell
18	chr8:122273800-122275600	Enhancers	Osteobl	bone
19	chr8:122273800-122275800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr8:122273800-122276000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr8:122274000-122275600	Enhancers	NHLF	lung
22	chr8:122274400-122274800	Weak transcription	NH-A	brain
23	chr8:122274600-122275000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr8:122274600-122275000	Flanking Active TSS	NHDF-Ad	bronchial
25	chr8:122274600-122275200	Enhancers	Cortex derived primary cultured neurospheres	brain

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