Variant report

Variant	rs73707718
Chromosome Location	chr8:127883099-127883100
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs56125078	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58327082	1.00[AMR][1000 genomes]
rs73707714	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73707716	1.00[AMR][1000 genomes]
rs73707720	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1819408	chr8:127835876-127898165	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv6382	chr8:127845446-127890549	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv831456	chr8:127861583-128025508	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv429940	chr8:127881818-127929818	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:127876600-127886400	Weak transcription	Fetal Muscle Leg	muscle
2	chr8:127878000-127885800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr8:127878600-127889000	Weak transcription	Right Atrium	heart
4	chr8:127881800-127888600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr8:127883000-127883400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr8:127883000-127884600	Enhancers	GM12878-XiMat	blood
7	chr8:127883000-127888400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:127883000-127888600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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