Variant report

Variant	rs73708228
Chromosome Location	chr8:129880092-129880093
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs59158711	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59844757	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73708251	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73708254	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv517445	chr8:129859924-129881299	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv982118	chr8:129880035-129884391	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129874600-129886200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr8:129875000-129887000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:129876200-129886200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr8:129877000-129885000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:129879000-129880200	Enhancers	NHDF-Ad	bronchial
6	chr8:129879000-129881400	Enhancers	Osteobl	bone
7	chr8:129879000-129881600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:129879600-129880800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr8:129879800-129881000	Weak transcription	NH-A	brain
10	chr8:129880000-129880800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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