Variant report

Variant	rs73709636
Chromosome Location	chr7:98908201-98908202
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs59709577	0.81[AFR][1000 genomes]
rs73709633	1.00[AFR][1000 genomes]
rs73709634	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3433144	chr7:98777878-99060209	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
2	nsv831068	chr7:98819572-99006481	Weak transcription Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:98903800-98910400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr7:98906400-98910200	Weak transcription	Brain Cingulate Gyrus	brain
3	chr7:98906800-98908600	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
4	chr7:98906800-98912000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr7:98907200-98910400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr7:98907400-98908400	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr7:98907400-98909200	Weak transcription	Stomach Mucosa	stomach
8	chr7:98907800-98908400	ZNF genes & repeats	Aorta	Aorta
9	chr7:98908000-98908400	ZNF genes & repeats	Brain Hippocampus Middle	brain
10	chr7:98908000-98917800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr7:98908200-98910000	Weak transcription	A549	lung
12	chr7:98908200-98922600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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