Variant report

Variant	rs73711204
Chromosome Location	chr8:131325985-131325986
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:131325475..131327284-chr8:131328530..131331527,2	MCF-7	breast:
2	chr8:131325774..131327833-chr8:131336321..131339218,2	K562	blood:
3	chr8:131324792..131327284-chr8:131328218..131332203,4	K562	blood:
4	chr8:131320555..131323239-chr8:131323603..131327093,4	MCF-7	breast:
5	chr8:131324792..131327507-chr8:131328218..131332203,4	K562	blood:
6	chr8:131320315..131322407-chr8:131325381..131327226,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs59012190	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73712881	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869334	chr8:131025093-131651487	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv915580	chr8:131025093-131667578	Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
3	nsv465810	chr8:131039109-131331012	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
4	nsv612234	chr8:131039109-131331012	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
5	nsv533085	chr8:131042781-131755007	Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
6	nsv870148	chr8:131206342-131373989	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:114 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:131307000-131329600	Weak transcription	Aorta	Aorta
2	chr8:131310800-131328200	Weak transcription	Lung	lung
3	chr8:131313400-131335000	Weak transcription	Pancreas	Pancrea
4	chr8:131315400-131326000	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr8:131315400-131326000	Weak transcription	Placenta	Placenta
6	chr8:131315600-131326000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr8:131315600-131331600	Weak transcription	Thymus	Thymus
8	chr8:131315600-131342000	Weak transcription	Rectal Smooth Muscle	rectum
9	chr8:131315600-131353400	Weak transcription	Dnd41	blood
10	chr8:131317400-131326000	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr8:131319000-131326000	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr8:131319200-131326000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr8:131319400-131333600	Weak transcription	HepG2	liver
14	chr8:131319800-131329800	Weak transcription	Right Ventricle	heart
15	chr8:131320000-131326000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr8:131320000-131326000	Weak transcription	Fetal Muscle Leg	muscle
17	chr8:131322000-131326000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr8:131322000-131326000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr8:131322000-131326000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
20	chr8:131322000-131326000	Weak transcription	Psoas Muscle	Psoas
21	chr8:131322000-131326000	Weak transcription	Right Atrium	heart
22	chr8:131322000-131326000	Weak transcription	Spleen	Spleen
23	chr8:131322000-131326200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
24	chr8:131322000-131326800	Enhancers	Fetal Heart	heart
25	chr8:131322000-131328800	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr8:131322000-131329000	Weak transcription	Sigmoid Colon	Sigmoid Colon
27	chr8:131322000-131335000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr8:131322000-131338200	Weak transcription	Esophagus	oesophagus
29	chr8:131322200-131326000	Weak transcription	HSMMtube	muscle
30	chr8:131322200-131328800	Weak transcription	Small Intestine	intestine
31	chr8:131322600-131326800	Enhancers	iPS-18 Cell Line	embryonic stem cell
32	chr8:131322800-131326800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr8:131323000-131326000	Weak transcription	Duodenum Mucosa	Duodenum
34	chr8:131323000-131326600	Weak transcription	Rectal Mucosa Donor 29	rectum
35	chr8:131323200-131326200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
36	chr8:131323400-131326000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
37	chr8:131323400-131326000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
38	chr8:131323400-131326000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
39	chr8:131323400-131326200	Weak transcription	Brain Anterior Caudate	brain
40	chr8:131323400-131329600	Weak transcription	Brain Angular Gyrus	brain
41	chr8:131323400-131329800	Weak transcription	Brain Cingulate Gyrus	brain
42	chr8:131323400-131329800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
43	chr8:131323400-131345600	Weak transcription	Fetal Intestine Small	intestine
44	chr8:131323600-131331600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
45	chr8:131323800-131326000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr8:131324200-131326400	Enhancers	Ovary	ovary
47	chr8:131324200-131326600	Enhancers	HUES64 Cell Line	embryonic stem cell
48	chr8:131324200-131326800	Enhancers	Fetal Lung	lung
49	chr8:131324200-131327200	Enhancers	iPS-15b Cell Line	embryonic stem cell
50	chr8:131324400-131326400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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