Variant report

Variant	rs73712205
Chromosome Location	chr8:120669794-120669795
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16892935	0.91[AFR][1000 genomes]
rs56224112	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv868916	chr8:119911943-120762250	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	nsv534028	chr8:120348940-120906079	Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
3	nsv949368	chr8:120568034-121019872	Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
4	nsv1021071	chr8:120589963-120968317	Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
5	nsv891418	chr8:120600965-121301474	Active TSS Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
6	nsv465789	chr8:120636850-120994394	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
7	nsv612111	chr8:120636850-120994394	Flanking Active TSS Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
8	nsv427826	chr8:120642181-120953395	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:120667000-120673400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:120667400-120673400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:120667800-120672000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr8:120668000-120671400	Enhancers	Placenta	Placenta
5	chr8:120668000-120672200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr8:120668400-120669800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr8:120668600-120672000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr8:120668600-120672400	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr8:120668800-120669800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr8:120668800-120669800	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr8:120668800-120683600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr8:120669400-120669800	Weak transcription	Right Atrium	heart
13	chr8:120669400-120670000	Active TSS	Brain Anterior Caudate	brain
14	chr8:120669600-120669800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr8:120669600-120669800	Active TSS	Brain Angular Gyrus	brain
16	chr8:120669600-120669800	Active TSS	Brain Hippocampus Middle	brain
17	chr8:120669600-120670000	Active TSS	Brain Inferior Temporal Lobe	brain
18	chr8:120669600-120670000	Active TSS	Brain Substantia Nigra	brain
19	chr8:120669600-120670200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr8:120669600-120670200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr8:120669600-120670200	Active TSS	Brain Cingulate Gyrus	brain

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