Variant report

Variant	rs73722819
Chromosome Location	chr6:12761957-12761958
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1889061	1.00[EUR][1000 genomes]
rs1889062	1.00[EUR][1000 genomes]
rs6913787	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73726207	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9296456	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3521000	chr6:12561306-13128519	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv3521001	chr6:12561306-13128519	Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:12752600-12767200	Weak transcription	Fetal Brain Male	brain
2	chr6:12761000-12763000	Enhancers	NHDF-Ad	bronchial
3	chr6:12761200-12762000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr6:12761200-12763000	Enhancers	Muscle Satellite Cultured Cells	--
5	chr6:12761200-12763000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr6:12761200-12763200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr6:12761400-12762200	Enhancers	Brain Germinal Matrix	brain
8	chr6:12761400-12762400	Flanking Active TSS	HSMMtube	muscle
9	chr6:12761600-12762200	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr6:12761600-12762200	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr6:12761600-12762200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr6:12761600-12762200	Active TSS	HSMM	muscle
13	chr6:12761600-12762400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr6:12761800-12762000	Enhancers	NH-A	brain
15	chr6:12761800-12762200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr6:12761800-12762400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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