Variant report

Variant	rs73727105
Chromosome Location	chr7:150885104-150885105
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1)
CpG islands
(count:122)
Chromatin interactive
region (count:1)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SPI1	chr7:150885042-150885222	K562	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:150885103-150885153	RPTEC	kidney:	n/a
2	chr7:150885103-150885153	BJ	skin:	n/a
3	chr7:150885103-150885153	AG09319	gingival:	n/a
4	chr7:150885084-150885134	NH-A	brain:	n/a
5	chr7:150885103-150885153	ovcar-3	ovarian:	n/a
6	chr7:150885084-150885134	ovcar-3	ovarian:	n/a
7	chr7:150885084-150885134	Caco-2	colon:	n/a
8	chr7:150885103-150885153	HEK293	kidney:	embryo
9	chr7:150885103-150885153	SK-N-SH_RA	brain:	n/a
10	chr7:150885084-150885134	HEEpiC	esophagus:	n/a
11	chr7:150885084-150885134	ProgFib	skin:	n/a
12	chr7:150885103-150885153	PrEC	prostate:	n/a
13	chr7:150885084-150885134	MCF10A-Er-Src	breast:	n/a
14	chr7:150885103-150885153	HRPEpiC	eye:	n/a
15	chr7:150885103-150885153	AG04450	lung:	fetal
16	chr7:150885084-150885134	LNCaP	prostate:	n/a
17	chr7:150885084-150885134	HRE	kidney:	n/a
18	chr7:150885084-150885134	HNPCEpiC	eye:	n/a
19	chr7:150885103-150885153	ECC-1	luminal epithelium:	n/a
20	chr7:150885103-150885153	HepG2	liver:	n/a
21	chr7:150885084-150885134	AG04450	lung:	fetal
22	chr7:150885103-150885153	ProgFib	skin:	n/a
23	chr7:150885103-150885153	BE2_C	brain:	n/a
24	chr7:150885103-150885153	LNCaP	prostate:	n/a
25	chr7:150885103-150885153	SK-N-MC	brain:	n/a
26	chr7:150885103-150885153	NB4	blood:	n/a
27	chr7:150885103-150885153	IMR90	lung:	fetal
28	chr7:150885084-150885134	Hela-S3	cervix:	n/a
29	chr7:150885084-150885134	HCPEpiC	choroid plexus:	n/a
30	chr7:150885084-150885134	HMEC	breast:	n/a
31	chr7:150885103-150885153	NHDF-neo	bronchial:	n/a
32	chr7:150885084-150885134	PrEC	prostate:	n/a
33	chr7:150885103-150885153	GM19239	blood:	n/a
34	chr7:150885103-150885153	AG09309	skin:	n/a
35	chr7:150885084-150885134	Hepatocyte	liver:	n/a
36	chr7:150885103-150885153	H1-hESC	embryonic stem cell:	embryo
37	chr7:150885103-150885153	AG04449	skin:	fetal
38	chr7:150885084-150885134	T-47D	breast:	n/a
39	chr7:150885103-150885153	HCF	heart:	n/a
40	chr7:150885103-150885153	Caco-2	colon:	n/a
41	chr7:150885084-150885134	HPAEpiC	pulmonary alveolar:	n/a
42	chr7:150885084-150885134	U87	brain:	n/a
43	chr7:150885103-150885153	HNPCEpiC	eye:	n/a
44	chr7:150885103-150885153	U87	brain:	n/a
45	chr7:150885084-150885134	HRPEpiC	eye:	n/a
46	chr7:150885084-150885134	SAEC	small airway:	n/a
47	chr7:150885103-150885153	HPAEpiC	pulmonary alveolar:	n/a
48	chr7:150885103-150885153	HMEC	breast:	n/a
49	chr7:150885084-150885134	SKMC	muscle:	n/a
50	chr7:150885084-150885134	HIPEpiC	eye:	n/a

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:150863922..150866847-chr7:150884937..150887386,2	K562	blood:

No data

Variant related genes	Relation type
ASB10	TF binding region
ASB10	CpG island
ENSG00000164900	Chromatin interaction

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10252021	1.00[AMR][1000 genomes]
rs10281455	1.00[AMR][1000 genomes]
rs28650070	1.00[AMR][1000 genomes]
rs28716681	1.00[AMR][1000 genomes]
rs58120976	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60681403	1.00[AMR][1000 genomes]
rs6945773	1.00[AMR][1000 genomes]
rs73727103	1.00[AMR][1000 genomes]
rs73727488	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73727491	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1821419	chr7:150593315-150974269	Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	128 gene(s)	inside rSNPs	diseases
2	nsv889476	chr7:150729212-150951819	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	120 gene(s)	inside rSNPs	diseases
3	nsv889478	chr7:150732812-150889527	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
4	nsv831188	chr7:150735204-150912875	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
5	nsv889486	chr7:150775306-150891641	Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
6	nsv609034	chr7:150830015-150893629	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:150883400-150885600	Enhancers	Fetal Heart	heart
2	chr7:150884600-150885200	Bivalent Enhancer	HSMMtube	muscle
3	chr7:150884800-150885400	Enhancers	Fetal Muscle Leg	muscle
4	chr7:150884800-150885800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
5	chr7:150884800-150886600	Enhancers	GM12878-XiMat	blood
6	chr7:150884800-150889200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr7:150885000-150885600	Enhancers	Left Ventricle	heart
8	chr7:150885000-150885600	Enhancers	Right Ventricle	heart
9	chr7:150885000-150885600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
10	chr7:150885000-150885600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
11	chr7:150885000-150888200	Weak transcription	Psoas Muscle	Psoas
12	chr7:150885000-150910000	Weak transcription	Right Atrium	heart

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