Variant report

Variant	rs73730782
Chromosome Location	chr6:37488743-37488744
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:37464981..37466584-chr6:37488275..37490283,2	K562	blood:
2	chr6:37486519..37488969-chr6:37490130..37493160,3	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs3734314	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752124	chr6:37416219-37680622	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
2	nsv1016310	chr6:37473075-37528469	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37486400-37488800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:37486400-37490400	Enhancers	Primary T cells fromperipheralblood	blood
3	chr6:37486400-37490800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
4	chr6:37486600-37489800	Enhancers	Fetal Thymus	thymus
5	chr6:37486800-37491400	Enhancers	Primary T helper cells PMA-I stimulated	--
6	chr6:37487400-37490800	Weak transcription	Right Atrium	heart
7	chr6:37487400-37491000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
8	chr6:37487400-37492400	Enhancers	Primary T helper cells fromperipheralblood	blood
9	chr6:37487600-37498200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr6:37488200-37489200	Enhancers	Primary T killer memory cells from peripheral blood	blood
11	chr6:37488200-37489800	Enhancers	Primary T helper naive cells from peripheral blood	blood
12	chr6:37488400-37489000	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
13	chr6:37488400-37489200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr6:37488400-37489200	Enhancers	Dnd41	blood
15	chr6:37488400-37489400	Enhancers	Primary hematopoietic stem cells short term culture	blood
16	chr6:37488400-37489400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
17	chr6:37488400-37489400	Enhancers	Thymus	Thymus
18	chr6:37488400-37489400	Enhancers	HSMM	muscle
19	chr6:37488400-37489600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr6:37488400-37489800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
21	chr6:37488400-37491000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
22	chr6:37488600-37488800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr6:37488600-37488800	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr6:37488600-37489000	Enhancers	Fetal Brain Female	brain
25	chr6:37488600-37489200	Enhancers	Primary T cells from cord blood	blood
26	chr6:37488600-37489200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
27	chr6:37488600-37489400	Enhancers	Fetal Brain Male	brain
28	chr6:37488600-37489600	Enhancers	Primary hematopoietic stem cells	blood
29	chr6:37488600-37489600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr6:37488600-37489600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr6:37488600-37489600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
32	chr6:37488600-37491000	Enhancers	GM12878-XiMat	blood

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