Variant report

Variant	rs73737933
Chromosome Location	chr5:8015575-8015576
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:8003382..8004914-chr5:8014701..8016204,2	K562	blood:
2	chr5:8012836..8015830-chr5:9202478..9204498,2	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11739022	0.81[EUR][1000 genomes]
rs11740013	0.81[EUR][1000 genomes]
rs11742127	0.81[EUR][1000 genomes]
rs11742299	0.81[EUR][1000 genomes]
rs11742306	0.81[EUR][1000 genomes]
rs11742958	0.81[EUR][1000 genomes]
rs11743341	0.81[EUR][1000 genomes]
rs11746322	0.81[EUR][1000 genomes]
rs13159876	0.81[EUR][1000 genomes]
rs13183355	0.81[EUR][1000 genomes]
rs13183364	0.81[EUR][1000 genomes]
rs13183365	0.81[EUR][1000 genomes]
rs13183531	0.81[EUR][1000 genomes]
rs16879727	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17268712	0.83[EUR][1000 genomes]
rs2961995	0.81[ASN][1000 genomes]
rs2966956	1.00[ASN][1000 genomes]
rs34108417	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34293407	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34929832	0.81[EUR][1000 genomes]
rs35264036	0.81[EUR][1000 genomes]
rs35327167	0.81[EUR][1000 genomes]
rs35639375	0.81[EUR][1000 genomes]
rs6883198	0.81[EUR][1000 genomes]
rs6883798	0.81[EUR][1000 genomes]
rs6884115	0.81[EUR][1000 genomes]
rs6896921	0.81[EUR][1000 genomes]
rs71604202	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs71606018	0.81[EUR][1000 genomes]
rs71606020	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916892	chr5:7634377-8158890	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv533983	chr5:7701457-8275379	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
3	nsv597005	chr5:7860404-8093077	Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
4	esv1815664	chr5:8011811-8019413	ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv17801	chr5:8013215-8024076	Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	nsv597026	chr5:8013893-8016059	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv1020991	chr5:8014412-8129558	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:8013800-8015600	Enhancers	Primary B cells from peripheral blood	blood
2	chr5:8014000-8015600	Enhancers	Primary B cells from cord blood	blood

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