Variant report

Variant	rs73746076
Chromosome Location	chr5:27087486-27087487
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73746083	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv917332	chr5:26620698-27232713	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv868856	chr5:26789778-27321390	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases
3	nsv881006	chr5:27010686-27231314	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:27083800-27088000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr5:27084600-27088600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr5:27085200-27088000	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr5:27085400-27087800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr5:27085400-27087800	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr5:27085400-27087800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr5:27085600-27087800	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr5:27085600-27088200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr5:27086600-27088800	Enhancers	Fetal Lung	lung
10	chr5:27087200-27088400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr5:27087400-27087800	Weak transcription	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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